Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 AL589743.5-201ENST00000616611 1050 ntBASIC14.35□□□□□ -0.11
SMIM12Q96EX1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM12Q96EX1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 KRT8P8-201ENST00000434750 1448 ntBASIC14.34□□□□□ -0.11
SMIM12Q96EX1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
SMIM12Q96EX1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
SMIM12Q96EX1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM12Q96EX1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SMIM12Q96EX1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM12Q96EX1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM12Q96EX1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.33□□□□□ -0.11
SMIM12Q96EX1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM12Q96EX1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 AC012313.1-201ENST00000593393 3059 ntBASIC14.33□□□□□ -0.12
SMIM12Q96EX1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.33□□□□□ -0.12
SMIM12Q96EX1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM12Q96EX1 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.32□□□□□ -0.12
SMIM12Q96EX1 KRT18P14-201ENST00000534205 1250 ntBASIC14.32□□□□□ -0.12
SMIM12Q96EX1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms