Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 AC006333.2-201ENST00000607957 2099 ntBASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 AC011558.1-201ENST00000623459 338 ntBASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 AL023973.1-201ENST00000624619 620 ntBASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC3Q96DC8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 AK4P3-201ENST00000418260 669 ntBASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 AL441883.1-201ENST00000566170 1045 ntBASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 HOXB1-202ENST00000577092 1414 ntBASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ECHDC3Q96DC8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 RNF152P1-201ENST00000397754 604 ntBASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 AC063952.2-201ENST00000498792 1227 ntBASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 AL357033.4-201ENST00000617703 1807 ntBASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ECHDC3Q96DC8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 KRT8P7-201ENST00000533003 1432 ntBASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms