Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF34Q969K3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RNF34Q969K3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF34Q969K3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF34Q969K3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF34Q969K3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RNF34Q969K3 AL049812.1-201ENST00000432563 2267 ntBASIC19.69■□□□□ 0.74
RNF34Q969K3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF34Q969K3 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.69■□□□□ 0.74
RNF34Q969K3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF34Q969K3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 AC211429.1-201ENST00000415277 523 ntBASIC19.69■□□□□ 0.74
RNF34Q969K3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 CA15P1-201ENST00000481698 905 ntBASIC19.69■□□□□ 0.74
RNF34Q969K3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF34Q969K3 EGLN1P1-201ENST00000531623 762 ntBASIC19.69■□□□□ 0.74
RNF34Q969K3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.69■□□□□ 0.74
RNF34Q969K3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF34Q969K3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF34Q969K3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF34Q969K3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF34Q969K3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF34Q969K3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 TSPY14P-201ENST00000303979 915 ntBASIC19.68■□□□□ 0.74
RNF34Q969K3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF34Q969K3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF34Q969K3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF34Q969K3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 TSPY17P-201ENST00000450329 467 ntBASIC19.68■□□□□ 0.74
RNF34Q969K3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF34Q969K3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF34Q969K3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF34Q969K3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF34Q969K3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF34Q969K3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF34Q969K3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF34Q969K3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF34Q969K3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RNF34Q969K3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF34Q969K3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 KRT18P22-201ENST00000402024 1347 ntBASIC19.67■□□□□ 0.74
RNF34Q969K3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF34Q969K3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RNF34Q969K3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF34Q969K3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF34Q969K3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RNF34Q969K3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
RNF34Q969K3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF34Q969K3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF34Q969K3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF34Q969K3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF34Q969K3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF34Q969K3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF34Q969K3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF34Q969K3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF34Q969K3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RNF34Q969K3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
RNF34Q969K3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms