Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
USP13Q92995 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP13Q92995 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP13Q92995 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP13Q92995 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP13Q92995 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
USP13Q92995 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.69■□□□□ 0.74
USP13Q92995 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.69■□□□□ 0.74
USP13Q92995 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.69■□□□□ 0.74
USP13Q92995 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.69■□□□□ 0.74
USP13Q92995 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.69■□□□□ 0.74
USP13Q92995 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.69■□□□□ 0.74
USP13Q92995 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.69■□□□□ 0.74
USP13Q92995 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.69■□□□□ 0.74
USP13Q92995 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
USP13Q92995 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.69■□□□□ 0.74
USP13Q92995 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP13Q92995 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.69■□□□□ 0.74
USP13Q92995 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
USP13Q92995 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.69■□□□□ 0.74
USP13Q92995 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP13Q92995 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.68■□□□□ 0.74
USP13Q92995 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP13Q92995 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP13Q92995 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP13Q92995 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.68■□□□□ 0.74
USP13Q92995 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
USP13Q92995 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.68■□□□□ 0.74
USP13Q92995 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP13Q92995 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP13Q92995 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
USP13Q92995 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP13Q92995 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP13Q92995 IER3-202ENST00000376377 1350 ntBASIC19.68■□□□□ 0.74
USP13Q92995 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP13Q92995 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.68■□□□□ 0.74
USP13Q92995 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
USP13Q92995 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.67■□□□□ 0.74
USP13Q92995 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.67■□□□□ 0.74
USP13Q92995 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.67■□□□□ 0.74
USP13Q92995 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
USP13Q92995 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
USP13Q92995 AC112907.2-201ENST00000448639 330 ntBASIC19.67■□□□□ 0.74
USP13Q92995 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.67■□□□□ 0.74
USP13Q92995 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
USP13Q92995 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.67■□□□□ 0.74
USP13Q92995 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
USP13Q92995 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.67■□□□□ 0.74
USP13Q92995 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.67■□□□□ 0.74
USP13Q92995 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
USP13Q92995 AC005332.1-201ENST00000577698 1310 ntBASIC19.67■□□□□ 0.74
USP13Q92995 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.67■□□□□ 0.74
USP13Q92995 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP13Q92995 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
USP13Q92995 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
USP13Q92995 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.67■□□□□ 0.74
USP13Q92995 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP13Q92995 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.66■□□□□ 0.74
USP13Q92995 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 GPAT2P1-201ENST00000444924 1672 ntBASIC19.66■□□□□ 0.74
USP13Q92995 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP13Q92995 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
USP13Q92995 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 STARP1-201ENST00000397973 869 ntBASIC19.66■□□□□ 0.74
USP13Q92995 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.66■□□□□ 0.74
USP13Q92995 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.66■□□□□ 0.74
USP13Q92995 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.66■□□□□ 0.74
USP13Q92995 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.66■□□□□ 0.74
USP13Q92995 HYMAI.1-201ENST00000620949 238 ntBASIC19.66■□□□□ 0.74
USP13Q92995 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.66■□□□□ 0.74
USP13Q92995 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms