Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SLC44A1Q8WWI5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 Z85996.1-201ENST00000494644 937 ntBASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 AC004264.1-201ENST00000608354 794 ntBASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A1Q8WWI5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 KRT8P32-201ENST00000512863 1461 ntBASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 AC008764.6-201ENST00000595909 2069 ntBASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 AP000997.3-201ENST00000623333 2250 ntBASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SLC44A1Q8WWI5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A1Q8WWI5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms