Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 KRT8P11-201ENST00000409686 1436 ntBASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 AC004951.3-201ENST00000418645 1148 ntBASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 PRSS44-201ENST00000515154 1146 ntBASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 PKD1P1-201ENST00000458669 6805 ntBASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 AL512353.2-201ENST00000448759 1962 ntBASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
TRAF3IP1Q8TDR0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 AL031598.1-201ENST00000561511 1773 ntBASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 RCC2P6-201ENST00000526625 1557 ntBASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 AC026271.3-201ENST00000571884 352 ntBASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAF3IP1Q8TDR0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 AC142381.4-202ENST00000563973 229 ntBASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 AC011298.2-201ENST00000617989 482 ntBASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP1Q8TDR0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 AL135905.2-201ENST00000584934 1404 ntBASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 AC091390.4-202ENST00000476426 537 ntBASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms