Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 VENTXP7-201ENST00000475503 772 ntBASIC22.26■■□□□ 1.15
TRPM4Q8TD43 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 AL049840.3-201ENST00000602669 611 ntBASIC22.26■■□□□ 1.15
TRPM4Q8TD43 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRPM4Q8TD43 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 MINOS1P3-201ENST00000457048 203 ntBASIC22.25■■□□□ 1.15
TRPM4Q8TD43 BNIP3P18-201ENST00000593976 575 ntBASIC22.25■■□□□ 1.15
TRPM4Q8TD43 AC024563.2-201ENST00000603282 481 ntBASIC22.25■■□□□ 1.15
TRPM4Q8TD43 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRPM4Q8TD43 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 RNPS1P1-201ENST00000507437 918 ntBASIC22.24■■□□□ 1.15
TRPM4Q8TD43 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 MIR7706-201ENST00000613747 67 ntBASIC22.24■■□□□ 1.15
TRPM4Q8TD43 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRPM4Q8TD43 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.23■■□□□ 1.15
TRPM4Q8TD43 AL353692.3-201ENST00000407031 1396 ntBASIC22.23■■□□□ 1.15
TRPM4Q8TD43 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRPM4Q8TD43 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.22■■□□□ 1.15
TRPM4Q8TD43 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRPM4Q8TD43 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRPM4Q8TD43 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.22■■□□□ 1.15
TRPM4Q8TD43 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
TRPM4Q8TD43 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
TRPM4Q8TD43 MIR940-201ENST00000401276 94 ntBASIC22.22■■□□□ 1.15
TRPM4Q8TD43 BX842568.4-201ENST00000421222 227 ntBASIC22.22■■□□□ 1.15
TRPM4Q8TD43 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRPM4Q8TD43 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRPM4Q8TD43 AF186996.4-201ENST00000467186 377 ntBASIC22.22■■□□□ 1.15
TRPM4Q8TD43 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms