Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 ANO7L1-203ENST00000602586 1720 ntBASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCHCR1Q8TD31 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 BICD1-207ENST00000551848 1962 ntBASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCHCR1Q8TD31 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCHCR1Q8TD31 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms