Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 MIR574-201ENST00000385209 96 ntBASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 AL023284.2-201ENST00000405850 579 ntBASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 AC074051.2-201ENST00000565115 352 ntBASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNIP1Q8TAD8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 LINC01521-201ENST00000504184 1943 ntBASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 AC112497.1-201ENST00000624824 639 ntBASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 AF228730.7-201ENST00000641842 219 ntBASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNIP1Q8TAD8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNIP1Q8TAD8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SNIP1Q8TAD8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SNIP1Q8TAD8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 MCCD1P1-208ENST00000445732 328 ntBASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 SAPCD2P3-201ENST00000455031 850 ntBASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 Z69720.1-201ENST00000601483 472 ntBASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNIP1Q8TAD8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 Z83836.1-201ENST00000624605 1642 ntBASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 AKR1C7P-201ENST00000305623 895 ntBASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 AC099336.1-202ENST00000602961 463 ntBASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms