Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 PRORSD1P-201ENST00000295112 541 ntBASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 AC008687.6-201ENST00000596318 630 ntBASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DEPDC4Q8N2C3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 TFP1-202ENST00000475455 1573 ntBASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 AC073648.6-201ENST00000641589 218 ntBASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
DEPDC4Q8N2C3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 AC068880.1-201ENST00000507289 2297 ntBASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 AL158047.1-201ENST00000445918 881 ntBASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEPDC4Q8N2C3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 ABALON-201ENST00000629058 1903 ntBASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms