Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
SMC5Q8IY18 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 AC142381.4-202ENST00000563973 229 ntBASIC23.32■■□□□ 1.32
SMC5Q8IY18 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMC5Q8IY18 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.32■■□□□ 1.32
SMC5Q8IY18 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.31■■□□□ 1.32
SMC5Q8IY18 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC23.31■■□□□ 1.32
SMC5Q8IY18 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
SMC5Q8IY18 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.31■■□□□ 1.32
SMC5Q8IY18 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.31■■□□□ 1.32
SMC5Q8IY18 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
SMC5Q8IY18 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.31■■□□□ 1.32
SMC5Q8IY18 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMC5Q8IY18 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 AL109659.2-201ENST00000606809 1674 ntBASIC23.3■■□□□ 1.32
SMC5Q8IY18 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 RPS2P55-201ENST00000397318 883 ntBASIC23.3■■□□□ 1.32
SMC5Q8IY18 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 AC107956.1-201ENST00000494359 873 ntBASIC23.3■■□□□ 1.32
SMC5Q8IY18 NUDT16P1-203ENST00000513809 620 ntBASIC23.3■■□□□ 1.32
SMC5Q8IY18 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMC5Q8IY18 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SMC5Q8IY18 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SMC5Q8IY18 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SMC5Q8IY18 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC23.29■■□□□ 1.32
SMC5Q8IY18 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.29■■□□□ 1.32
SMC5Q8IY18 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
SMC5Q8IY18 DGCR10-201ENST00000609839 495 ntBASIC23.29■■□□□ 1.32
SMC5Q8IY18 AC113410.3-201ENST00000623366 203 ntBASIC23.29■■□□□ 1.32
SMC5Q8IY18 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.29■■□□□ 1.32
SMC5Q8IY18 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.29■■□□□ 1.32
SMC5Q8IY18 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.29■■□□□ 1.32
SMC5Q8IY18 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMC5Q8IY18 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
SMC5Q8IY18 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms