Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBR1Q8IWV7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
UBR1Q8IWV7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC26.77■■□□□ 1.88
UBR1Q8IWV7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC26.77■■□□□ 1.88
UBR1Q8IWV7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBR1Q8IWV7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBR1Q8IWV7 GABARAPL3-202ENST00000624044 1851 ntBASIC26.77■■□□□ 1.88
UBR1Q8IWV7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBR1Q8IWV7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
UBR1Q8IWV7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
UBR1Q8IWV7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.88
UBR1Q8IWV7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC26.76■■□□□ 1.88
UBR1Q8IWV7 AL353692.3-201ENST00000407031 1396 ntBASIC26.76■■□□□ 1.88
UBR1Q8IWV7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
UBR1Q8IWV7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC26.76■■□□□ 1.88
UBR1Q8IWV7 TERC-201ENST00000602385 541 ntBASIC26.76■■□□□ 1.88
UBR1Q8IWV7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.88
UBR1Q8IWV7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBR1Q8IWV7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBR1Q8IWV7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBR1Q8IWV7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC26.76■■□□□ 1.87
UBR1Q8IWV7 AC034236.2-201ENST00000606662 1610 ntBASIC26.76■■□□□ 1.87
UBR1Q8IWV7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBR1Q8IWV7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBR1Q8IWV7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
UBR1Q8IWV7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC26.76■■□□□ 1.87
UBR1Q8IWV7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC26.76■■□□□ 1.87
UBR1Q8IWV7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.75■■□□□ 1.87
UBR1Q8IWV7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 MINOS1P3-201ENST00000457048 203 ntBASIC26.74■■□□□ 1.87
UBR1Q8IWV7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
UBR1Q8IWV7 PMS2P7-201ENST00000506558 1336 ntBASIC26.74■■□□□ 1.87
UBR1Q8IWV7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 FGFR3P6-201ENST00000457012 610 ntBASIC26.73■■□□□ 1.87
UBR1Q8IWV7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 IGHV3-22-201ENST00000520721 359 ntBASIC26.73■■□□□ 1.87
UBR1Q8IWV7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 AC114341.1-201ENST00000618070 349 ntBASIC26.73■■□□□ 1.87
UBR1Q8IWV7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 CYP51A1P1-201ENST00000492267 1507 ntBASIC26.73■■□□□ 1.87
UBR1Q8IWV7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
UBR1Q8IWV7 AC006333.2-201ENST00000607957 2099 ntBASIC26.72■■□□□ 1.87
UBR1Q8IWV7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 CCS-201ENST00000310190 942 ntTSL 5 BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
UBR1Q8IWV7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC26.71■■□□□ 1.87
UBR1Q8IWV7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC26.71■■□□□ 1.87
UBR1Q8IWV7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
UBR1Q8IWV7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
UBR1Q8IWV7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms