Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 LINC01465-201ENST00000408887 1940 ntBASIC17.96■□□□□ 0.47
RAB43Q86YS6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.96■□□□□ 0.46
RAB43Q86YS6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RAB43Q86YS6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 KRT8P41-201ENST00000533985 1514 ntBASIC17.95■□□□□ 0.46
RAB43Q86YS6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 AC092647.4-201ENST00000457211 535 ntBASIC17.95■□□□□ 0.46
RAB43Q86YS6 AC063952.2-201ENST00000498792 1227 ntBASIC17.95■□□□□ 0.46
RAB43Q86YS6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 PRSS44-201ENST00000515154 1146 ntBASIC17.95■□□□□ 0.46
RAB43Q86YS6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RAB43Q86YS6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB43Q86YS6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 AL691432.2-201ENST00000607222 2038 ntBASIC17.94■□□□□ 0.46
RAB43Q86YS6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.94■□□□□ 0.46
RAB43Q86YS6 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.94■□□□□ 0.46
RAB43Q86YS6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 AC139887.4-201ENST00000607877 719 ntBASIC17.94■□□□□ 0.46
RAB43Q86YS6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 AC141257.4-201ENST00000634557 245 ntBASIC17.94■□□□□ 0.46
RAB43Q86YS6 AC136944.6-201ENST00000634818 245 ntBASIC17.94■□□□□ 0.46
RAB43Q86YS6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 AL031432.5-201ENST00000641059 760 ntBASIC17.94■□□□□ 0.46
RAB43Q86YS6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB43Q86YS6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB43Q86YS6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB43Q86YS6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB43Q86YS6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB43Q86YS6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAB43Q86YS6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB43Q86YS6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.93■□□□□ 0.46
RAB43Q86YS6 AC020763.4-201ENST00000623414 4170 ntBASIC17.93■□□□□ 0.46
RAB43Q86YS6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB43Q86YS6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB43Q86YS6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAB43Q86YS6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB43Q86YS6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAB43Q86YS6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB43Q86YS6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms