Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 BX276092.5-203ENST00000456199 560 ntBASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI1Q7Z5J4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 AC079602.3-201ENST00000623931 403 ntBASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 AL023284.2-201ENST00000405850 579 ntBASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAI1Q7Z5J4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 AL391807.1-203ENST00000604392 2365 ntBASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 AL162741.1-201ENST00000565563 1558 ntBASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 KRT8P3-201ENST00000519669 1449 ntBASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 MCCD1P1-208ENST00000445732 328 ntBASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 PRELID1P1-202ENST00000567272 903 ntBASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 MIR3917-201ENST00000580971 93 ntBASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI1Q7Z5J4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 AC024243.1-201ENST00000609234 778 ntBASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 AL732292.2-201ENST00000609649 430 ntBASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 AL032819.2-201ENST00000624543 2162 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms