Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 AC005104.2-201ENST00000427818 678 ntBASIC13.09□□□□□ -0.31
CSMD3Q7Z407 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD3Q7Z407 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.08□□□□□ -0.31
CSMD3Q7Z407 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD3Q7Z407 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 USP48-205ENST00000421625 2818 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.08□□□□□ -0.32
CSMD3Q7Z407 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 AC008556.1-201ENST00000610908 2040 ntBASIC13.07□□□□□ -0.32
CSMD3Q7Z407 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 AC009237.14-201ENST00000609975 1594 ntBASIC13.07□□□□□ -0.32
CSMD3Q7Z407 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.07□□□□□ -0.32
CSMD3Q7Z407 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD3Q7Z407 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 RPL13AP23-201ENST00000480739 586 ntBASIC13.06□□□□□ -0.32
CSMD3Q7Z407 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 AC099336.1-202ENST00000602961 463 ntBASIC13.06□□□□□ -0.32
CSMD3Q7Z407 AC010240.3-201ENST00000607688 395 ntBASIC13.06□□□□□ -0.32
CSMD3Q7Z407 AL592071.1-201ENST00000611956 408 ntBASIC13.06□□□□□ -0.32
CSMD3Q7Z407 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD3Q7Z407 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms