Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.85■■□□□ 1.41
RGPD4Q7Z3J3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RGPD4Q7Z3J3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RGPD4Q7Z3J3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
RGPD4Q7Z3J3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.84■■□□□ 1.41
RGPD4Q7Z3J3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RGPD4Q7Z3J3 SDHAP1-207ENST00000440850 2000 ntBASIC23.84■■□□□ 1.41
RGPD4Q7Z3J3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.84■■□□□ 1.41
RGPD4Q7Z3J3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RGPD4Q7Z3J3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.83■■□□□ 1.41
RGPD4Q7Z3J3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.83■■□□□ 1.41
RGPD4Q7Z3J3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RGPD4Q7Z3J3 AC083906.6-201ENST00000641366 219 ntBASIC23.83■■□□□ 1.41
RGPD4Q7Z3J3 AC079781.4-201ENST00000641908 219 ntBASIC23.83■■□□□ 1.41
RGPD4Q7Z3J3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.83■■□□□ 1.41
RGPD4Q7Z3J3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RGPD4Q7Z3J3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RGPD4Q7Z3J3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RGPD4Q7Z3J3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 KRT18P3-201ENST00000451602 1288 ntBASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 RNA5SP415-201ENST00000517246 115 ntBASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 SART3-203ENST00000546611 1184 ntBASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 MIR3687-2-201ENST00000577708 61 ntBASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 MIR3687-1-201ENST00000614492 61 ntBASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 AC008735.5-201ENST00000623544 497 ntBASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
RGPD4Q7Z3J3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 AL691432.2-201ENST00000607222 2038 ntBASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 RPS2P28-201ENST00000314255 741 ntBASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 AC021087.4-201ENST00000563761 564 ntBASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.82■■□□□ 1.4
RGPD4Q7Z3J3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RGPD4Q7Z3J3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 AC112482.1-201ENST00000492080 688 ntBASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 MTDHP3-201ENST00000594186 672 ntBASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RGPD4Q7Z3J3 AC008556.1-201ENST00000610908 2040 ntBASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms