Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 ABALON-201ENST00000629058 1903 ntBASIC17.35■□□□□ 0.37
TUBA1AQ71U36 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBA1AQ71U36 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 AL023875.1-201ENST00000640777 796 ntBASIC17.34■□□□□ 0.37
TUBA1AQ71U36 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TUBA1AQ71U36 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.33■□□□□ 0.37
TUBA1AQ71U36 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TUBA1AQ71U36 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBA1AQ71U36 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
TUBA1AQ71U36 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBA1AQ71U36 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBA1AQ71U36 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
TUBA1AQ71U36 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TUBA1AQ71U36 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 AC098590.1-201ENST00000468126 897 ntBASIC17.33■□□□□ 0.36
TUBA1AQ71U36 C1QBPP2-201ENST00000528754 825 ntBASIC17.33■□□□□ 0.36
TUBA1AQ71U36 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 AC067852.2-201ENST00000590513 2313 ntBASIC17.33■□□□□ 0.36
TUBA1AQ71U36 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms