Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 MCCD1P1-208ENST00000445732 328 ntBASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 KRT16P4-201ENST00000453883 522 ntBASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 SEC1P-202ENST00000473944 940 ntBASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 GPAT2P1-201ENST00000444924 1672 ntBASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
SHISA2Q6UWI4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 AP001005.1-201ENST00000571755 1248 ntBASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 AC099336.1-202ENST00000602961 463 ntBASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 AF228730.7-201ENST00000641842 219 ntBASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA2Q6UWI4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
SHISA2Q6UWI4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHISA2Q6UWI4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHISA2Q6UWI4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.58□□□□□ -0.07
SHISA2Q6UWI4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.58□□□□□ -0.07
SHISA2Q6UWI4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 MIR574-201ENST00000385209 96 ntBASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 AL023284.2-201ENST00000405850 579 ntBASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 MIR1233-2-201ENST00000408138 82 ntBASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 MIR1233-1-201ENST00000408722 82 ntBASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 SAPCD2P3-201ENST00000455031 850 ntBASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 AL671883.3-201ENST00000603274 991 ntBASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.58□□□□□ -0.08
SHISA2Q6UWI4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms