Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 AC068880.1-201ENST00000507289 2297 ntBASIC16.38■□□□□ 0.21
C11orf88Q6PI97 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 AC091874.3-201ENST00000512672 1195 ntBASIC16.38■□□□□ 0.21
C11orf88Q6PI97 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 AC098934.4-201ENST00000564127 592 ntBASIC16.38■□□□□ 0.21
C11orf88Q6PI97 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 AL356652.1-201ENST00000615962 565 ntBASIC16.37■□□□□ 0.21
C11orf88Q6PI97 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 AC106820.2-201ENST00000563775 3264 ntBASIC16.37■□□□□ 0.21
C11orf88Q6PI97 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf88Q6PI97 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 AL354751.1-201ENST00000412768 1863 ntBASIC16.36■□□□□ 0.21
C11orf88Q6PI97 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 MIR4651-201ENST00000582622 73 ntBASIC16.36■□□□□ 0.21
C11orf88Q6PI97 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.36■□□□□ 0.21
C11orf88Q6PI97 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms