Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 AC124864.1-201ENST00000623408 392 ntBASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 HLA-A-201ENST00000376802 1334 ntBASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 AKR1C7P-201ENST00000305623 895 ntBASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 SAPCD2P3-201ENST00000455031 850 ntBASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 VENTXP7-201ENST00000475503 772 ntBASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR3Q6P9H4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 RN7SL606P-201ENST00000472779 293 ntBASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 AC024563.2-201ENST00000603282 481 ntBASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 AC120114.3-201ENST00000611923 658 ntBASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 BX640515.1-201ENST00000617215 977 ntBASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 KRT8P32-201ENST00000512863 1461 ntBASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CNKSR3Q6P9H4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 TSPY12P-201ENST00000421279 868 ntBASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 NSUN5P1-202ENST00000421140 1535 ntBASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 NSUN5P2-203ENST00000457352 1529 ntBASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR3Q6P9H4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 AC006333.2-201ENST00000607957 2099 ntBASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms