Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 KRT8P32-201ENST00000512863 1461 ntBASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 FSCN1P1-201ENST00000568912 1481 ntBASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 MTMR9LP-203ENST00000426597 1545 ntBASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 AC005082.1-201ENST00000413042 2259 ntBASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 AC012618.2-201ENST00000428058 849 ntBASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 NUDT16P1-203ENST00000513809 620 ntBASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF549Q6P9A3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 AL049637.2-201ENST00000641778 930 ntBASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF549Q6P9A3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms