Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX4Q33E94 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX4Q33E94 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX4Q33E94 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RFX4Q33E94 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.52■□□□□ 0.39
RFX4Q33E94 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX4Q33E94 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX4Q33E94 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX4Q33E94 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.52■□□□□ 0.39
RFX4Q33E94 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFX4Q33E94 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFX4Q33E94 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.52■□□□□ 0.39
RFX4Q33E94 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.52■□□□□ 0.39
RFX4Q33E94 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RFX4Q33E94 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RFX4Q33E94 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RFX4Q33E94 AL137784.2-201ENST00000607332 1000 ntBASIC17.51■□□□□ 0.39
RFX4Q33E94 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.51■□□□□ 0.39
RFX4Q33E94 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX4Q33E94 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RFX4Q33E94 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RFX4Q33E94 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RFX4Q33E94 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RFX4Q33E94 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 PRORSD1P-202ENST00000563365 2154 ntBASIC17.5■□□□□ 0.39
RFX4Q33E94 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 ESPNP-201ENST00000270691 2015 ntBASIC17.5■□□□□ 0.39
RFX4Q33E94 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RFX4Q33E94 FZD10-202ENST00000539839 3282 ntBASIC17.5■□□□□ 0.39
RFX4Q33E94 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RFX4Q33E94 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
RFX4Q33E94 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 KRT8P8-201ENST00000434750 1448 ntBASIC17.5■□□□□ 0.39
RFX4Q33E94 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 AC124283.5-201ENST00000624661 1809 ntBASIC17.5■□□□□ 0.39
RFX4Q33E94 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.5■□□□□ 0.39
RFX4Q33E94 RPS2P52-201ENST00000469610 820 ntBASIC17.5■□□□□ 0.39
RFX4Q33E94 AC083906.2-201ENST00000511578 360 ntBASIC17.5■□□□□ 0.39
RFX4Q33E94 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RFX4Q33E94 AL121832.2-201ENST00000610979 668 ntBASIC17.5■□□□□ 0.39
RFX4Q33E94 AC092118.2-201ENST00000613495 667 ntBASIC17.5■□□□□ 0.39
RFX4Q33E94 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.5■□□□□ 0.39
RFX4Q33E94 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.5■□□□□ 0.39
RFX4Q33E94 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.5■□□□□ 0.39
RFX4Q33E94 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
RFX4Q33E94 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.5■□□□□ 0.39
RFX4Q33E94 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX4Q33E94 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RFX4Q33E94 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.5■□□□□ 0.39
RFX4Q33E94 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.49■□□□□ 0.39
RFX4Q33E94 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
RFX4Q33E94 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.49■□□□□ 0.39
RFX4Q33E94 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.49■□□□□ 0.39
RFX4Q33E94 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.49■□□□□ 0.39
RFX4Q33E94 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.49■□□□□ 0.39
RFX4Q33E94 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.49■□□□□ 0.39
RFX4Q33E94 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 AC091874.3-201ENST00000512672 1195 ntBASIC17.49■□□□□ 0.39
RFX4Q33E94 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RFX4Q33E94 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.49■□□□□ 0.39
RFX4Q33E94 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.49■□□□□ 0.39
RFX4Q33E94 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.49■□□□□ 0.39
RFX4Q33E94 GNAS-203ENST00000306120 1878 ntBASIC17.49■□□□□ 0.39
RFX4Q33E94 PKD1P1-201ENST00000458669 6805 ntBASIC17.49■□□□□ 0.39
RFX4Q33E94 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.49■□□□□ 0.39
RFX4Q33E94 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX4Q33E94 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms