Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SIX1Q15475 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.42■□□□□ 0.7
SIX1Q15475 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SIX1Q15475 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.42■□□□□ 0.7
SIX1Q15475 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.42■□□□□ 0.7
SIX1Q15475 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX1Q15475 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SIX1Q15475 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SIX1Q15475 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX1Q15475 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SIX1Q15475 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.41■□□□□ 0.7
SIX1Q15475 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SIX1Q15475 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.41■□□□□ 0.7
SIX1Q15475 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SIX1Q15475 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX1Q15475 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 RPS2P4-201ENST00000476944 856 ntBASIC19.41■□□□□ 0.7
SIX1Q15475 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX1Q15475 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SIX1Q15475 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.41■□□□□ 0.7
SIX1Q15475 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.41■□□□□ 0.7
SIX1Q15475 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX1Q15475 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.4■□□□□ 0.7
SIX1Q15475 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SIX1Q15475 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.4■□□□□ 0.7
SIX1Q15475 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.4■□□□□ 0.7
SIX1Q15475 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.4■□□□□ 0.7
SIX1Q15475 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SIX1Q15475 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.4■□□□□ 0.7
SIX1Q15475 AC008040.2-201ENST00000461049 708 ntBASIC19.4■□□□□ 0.7
SIX1Q15475 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.4■□□□□ 0.7
SIX1Q15475 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.4■□□□□ 0.7
SIX1Q15475 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.4■□□□□ 0.7
SIX1Q15475 RN7SL471P-201ENST00000580476 299 ntBASIC19.4■□□□□ 0.7
SIX1Q15475 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 AC131212.4-201ENST00000623606 975 ntBASIC19.4■□□□□ 0.7
SIX1Q15475 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.4■□□□□ 0.7
SIX1Q15475 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SIX1Q15475 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.4■□□□□ 0.7
SIX1Q15475 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SIX1Q15475 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.4■□□□□ 0.7
SIX1Q15475 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.4■□□□□ 0.7
SIX1Q15475 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX1Q15475 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
SIX1Q15475 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIX1Q15475 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
SIX1Q15475 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIX1Q15475 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.7
SIX1Q15475 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX1Q15475 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX1Q15475 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX1Q15475 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SIX1Q15475 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SIX1Q15475 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX1Q15475 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX1Q15475 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX1Q15475 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
SIX1Q15475 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX1Q15475 AL353708.3-201ENST00000610272 989 ntBASIC19.39■□□□□ 0.69
SIX1Q15475 AC110285.5-201ENST00000611501 352 ntBASIC19.39■□□□□ 0.69
SIX1Q15475 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.39■□□□□ 0.69
SIX1Q15475 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.39■□□□□ 0.69
SIX1Q15475 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX1Q15475 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX1Q15475 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms