Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.95■□□□□ 0.62
AP1S1P61966 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.95■□□□□ 0.62
AP1S1P61966 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.95■□□□□ 0.62
AP1S1P61966 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.95■□□□□ 0.62
AP1S1P61966 AL138966.2-201ENST00000621997 464 ntBASIC18.95■□□□□ 0.62
AP1S1P61966 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.95■□□□□ 0.62
AP1S1P61966 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
AP1S1P61966 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
AP1S1P61966 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.95■□□□□ 0.62
AP1S1P61966 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
AP1S1P61966 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
AP1S1P61966 AC008556.1-201ENST00000610908 2040 ntBASIC18.95■□□□□ 0.62
AP1S1P61966 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
AP1S1P61966 AC006333.2-201ENST00000607957 2099 ntBASIC18.94■□□□□ 0.62
AP1S1P61966 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
AP1S1P61966 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.94■□□□□ 0.62
AP1S1P61966 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.94■□□□□ 0.62
AP1S1P61966 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.94■□□□□ 0.62
AP1S1P61966 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.94■□□□□ 0.62
AP1S1P61966 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 AC092865.7-201ENST00000641832 219 ntBASIC18.94■□□□□ 0.62
AP1S1P61966 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.94■□□□□ 0.62
AP1S1P61966 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
AP1S1P61966 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
AP1S1P61966 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S1P61966 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
AP1S1P61966 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.94■□□□□ 0.62
AP1S1P61966 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.94■□□□□ 0.62
AP1S1P61966 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
AP1S1P61966 BX323043.1-201ENST00000641006 1765 ntBASIC18.93■□□□□ 0.62
AP1S1P61966 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
AP1S1P61966 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.93■□□□□ 0.62
AP1S1P61966 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.93■□□□□ 0.62
AP1S1P61966 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.93■□□□□ 0.62
AP1S1P61966 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
AP1S1P61966 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.93■□□□□ 0.62
AP1S1P61966 AC141257.4-201ENST00000634557 245 ntBASIC18.93■□□□□ 0.62
AP1S1P61966 AC136944.6-201ENST00000634818 245 ntBASIC18.93■□□□□ 0.62
AP1S1P61966 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
AP1S1P61966 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.93■□□□□ 0.62
AP1S1P61966 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.93■□□□□ 0.62
AP1S1P61966 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
AP1S1P61966 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S1P61966 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP1S1P61966 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP1S1P61966 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP1S1P61966 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.92■□□□□ 0.62
AP1S1P61966 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.92■□□□□ 0.62
AP1S1P61966 MTMR9LP-203ENST00000426597 1545 ntBASIC18.92■□□□□ 0.62
AP1S1P61966 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
AP1S1P61966 MIR564-202ENST00000385049 94 ntBASIC18.92■□□□□ 0.62
AP1S1P61966 AP000523.1-201ENST00000398242 1049 ntBASIC18.92■□□□□ 0.62
AP1S1P61966 RCN1P1-201ENST00000400413 996 ntBASIC18.92■□□□□ 0.62
AP1S1P61966 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.92■□□□□ 0.62
AP1S1P61966 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.92■□□□□ 0.62
AP1S1P61966 KRT18P57-201ENST00000443599 1254 ntBASIC18.92■□□□□ 0.62
AP1S1P61966 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.92■□□□□ 0.62
AP1S1P61966 NEK4P2-201ENST00000580004 1012 ntBASIC18.92■□□□□ 0.62
AP1S1P61966 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP1S1P61966 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP1S1P61966 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.92■□□□□ 0.62
AP1S1P61966 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
AP1S1P61966 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP1S1P61966 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.92■□□□□ 0.62
AP1S1P61966 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP1S1P61966 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
AP1S1P61966 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms