Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 AL031133.1-201ENST00000406807 723 ntBASIC21.47■■□□□ 1.03
CHMP4BP1P59074 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.47■■□□□ 1.03
CHMP4BP1P59074 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 AP003041.3-201ENST00000527151 707 ntBASIC21.47■■□□□ 1.03
CHMP4BP1P59074 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 AC091076.1-201ENST00000610741 619 ntBASIC21.47■■□□□ 1.03
CHMP4BP1P59074 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CHMP4BP1P59074 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 KRT8P41-201ENST00000533985 1514 ntBASIC21.46■■□□□ 1.03
CHMP4BP1P59074 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.46■■□□□ 1.03
CHMP4BP1P59074 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 CKBP1-201ENST00000565489 1086 ntBASIC21.46■■□□□ 1.03
CHMP4BP1P59074 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP4BP1P59074 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 FAM8A6P-201ENST00000407496 1135 ntBASIC21.45■■□□□ 1.02
CHMP4BP1P59074 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CHMP4BP1P59074 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 NEFHP1-201ENST00000412845 2629 ntBASIC21.44■■□□□ 1.02
CHMP4BP1P59074 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP4BP1P59074 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms