Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PKNOX1P55347 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
PKNOX1P55347 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 AC068880.1-201ENST00000507289 2297 ntBASIC18.47■□□□□ 0.55
PKNOX1P55347 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.47■□□□□ 0.55
PKNOX1P55347 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PKNOX1P55347 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.47■□□□□ 0.55
PKNOX1P55347 TSPY23P-201ENST00000440136 739 ntBASIC18.47■□□□□ 0.55
PKNOX1P55347 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.47■□□□□ 0.55
PKNOX1P55347 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.47■□□□□ 0.55
PKNOX1P55347 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.47■□□□□ 0.55
PKNOX1P55347 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PKNOX1P55347 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PKNOX1P55347 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
PKNOX1P55347 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PKNOX1P55347 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PKNOX1P55347 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PKNOX1P55347 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.47■□□□□ 0.55
PKNOX1P55347 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PKNOX1P55347 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.47■□□□□ 0.55
PKNOX1P55347 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PKNOX1P55347 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PKNOX1P55347 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PKNOX1P55347 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.47■□□□□ 0.55
PKNOX1P55347 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.47■□□□□ 0.55
PKNOX1P55347 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.47■□□□□ 0.55
PKNOX1P55347 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.46■□□□□ 0.55
PKNOX1P55347 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.46■□□□□ 0.55
PKNOX1P55347 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PKNOX1P55347 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 AP000997.3-201ENST00000623333 2250 ntBASIC18.46■□□□□ 0.55
PKNOX1P55347 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PKNOX1P55347 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.46■□□□□ 0.55
PKNOX1P55347 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.46■□□□□ 0.55
PKNOX1P55347 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.46■□□□□ 0.55
PKNOX1P55347 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.46■□□□□ 0.55
PKNOX1P55347 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.46■□□□□ 0.55
PKNOX1P55347 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.46■□□□□ 0.55
PKNOX1P55347 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.46■□□□□ 0.55
PKNOX1P55347 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.46■□□□□ 0.55
PKNOX1P55347 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.46■□□□□ 0.55
PKNOX1P55347 AC069544.1-201ENST00000609399 999 ntBASIC18.46■□□□□ 0.55
PKNOX1P55347 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
PKNOX1P55347 NOC2LP2-201ENST00000407594 1944 ntBASIC18.46■□□□□ 0.55
PKNOX1P55347 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.46■□□□□ 0.55
PKNOX1P55347 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PKNOX1P55347 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PKNOX1P55347 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PKNOX1P55347 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.46■□□□□ 0.55
PKNOX1P55347 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.46■□□□□ 0.54
PKNOX1P55347 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PKNOX1P55347 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PKNOX1P55347 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PKNOX1P55347 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PKNOX1P55347 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.45■□□□□ 0.54
PKNOX1P55347 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PKNOX1P55347 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PKNOX1P55347 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.45■□□□□ 0.54
PKNOX1P55347 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PKNOX1P55347 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.45■□□□□ 0.54
PKNOX1P55347 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.45■□□□□ 0.54
PKNOX1P55347 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.45■□□□□ 0.54
PKNOX1P55347 AC026366.1-201ENST00000488803 879 ntBASIC18.45■□□□□ 0.54
PKNOX1P55347 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PKNOX1P55347 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PKNOX1P55347 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PKNOX1P55347 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PKNOX1P55347 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PKNOX1P55347 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.45■□□□□ 0.54
PKNOX1P55347 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PKNOX1P55347 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PKNOX1P55347 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PKNOX1P55347 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PKNOX1P55347 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PKNOX1P55347 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.44■□□□□ 0.54
PKNOX1P55347 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.44■□□□□ 0.54
PKNOX1P55347 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.44■□□□□ 0.54
PKNOX1P55347 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms