Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC26.96■■□□□ 1.91
CLTCL1P53675 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC26.96■■□□□ 1.91
CLTCL1P53675 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC26.96■■□□□ 1.91
CLTCL1P53675 AL031008.1-201ENST00000619963 541 ntBASIC26.96■■□□□ 1.91
CLTCL1P53675 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CLTCL1P53675 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC26.96■■□□□ 1.91
CLTCL1P53675 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CLTCL1P53675 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CLTCL1P53675 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CLTCL1P53675 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC26.96■■□□□ 1.91
CLTCL1P53675 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC26.96■■□□□ 1.91
CLTCL1P53675 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
CLTCL1P53675 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
CLTCL1P53675 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
CLTCL1P53675 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CLTCL1P53675 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC26.95■■□□□ 1.91
CLTCL1P53675 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC26.95■■□□□ 1.91
CLTCL1P53675 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC26.95■■□□□ 1.91
CLTCL1P53675 LINC00265-3P-201ENST00000447588 903 ntBASIC26.95■■□□□ 1.91
CLTCL1P53675 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
CLTCL1P53675 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.91
CLTCL1P53675 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
CLTCL1P53675 KRT18P1-202ENST00000452408 1331 ntBASIC26.95■■□□□ 1.9
CLTCL1P53675 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CLTCL1P53675 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CLTCL1P53675 AC079781.3-201ENST00000449110 356 ntBASIC26.94■■□□□ 1.9
CLTCL1P53675 KRT8P10-201ENST00000450021 1447 ntBASIC26.94■■□□□ 1.9
CLTCL1P53675 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
CLTCL1P53675 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CLTCL1P53675 HEIH-201ENST00000623091 1652 ntBASIC26.94■■□□□ 1.9
CLTCL1P53675 CYP51A1P1-201ENST00000492267 1507 ntBASIC26.94■■□□□ 1.9
CLTCL1P53675 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
CLTCL1P53675 Z98044.1-201ENST00000632503 1764 ntBASIC26.94■■□□□ 1.9
CLTCL1P53675 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CLTCL1P53675 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CLTCL1P53675 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC26.94■■□□□ 1.9
CLTCL1P53675 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
CLTCL1P53675 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC26.93■■□□□ 1.9
CLTCL1P53675 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC26.93■■□□□ 1.9
CLTCL1P53675 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CLTCL1P53675 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CLTCL1P53675 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CLTCL1P53675 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CLTCL1P53675 BID-204ENST00000399767 2129 ntTSL 2 BASIC26.93■■□□□ 1.9
CLTCL1P53675 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
CLTCL1P53675 FDX1P1-201ENST00000449115 551 ntBASIC26.93■■□□□ 1.9
CLTCL1P53675 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC26.93■■□□□ 1.9
CLTCL1P53675 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC26.93■■□□□ 1.9
CLTCL1P53675 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLTCL1P53675 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC26.92■■□□□ 1.9
CLTCL1P53675 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CLTCL1P53675 KRT8P50-201ENST00000562022 1438 ntBASIC26.92■■□□□ 1.9
CLTCL1P53675 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLTCL1P53675 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLTCL1P53675 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC26.92■■□□□ 1.9
CLTCL1P53675 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
CLTCL1P53675 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLTCL1P53675 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CLTCL1P53675 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CLTCL1P53675 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC26.92■■□□□ 1.9
CLTCL1P53675 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CLTCL1P53675 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLTCL1P53675 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CLTCL1P53675 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLTCL1P53675 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC26.91■■□□□ 1.9
CLTCL1P53675 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC26.91■■□□□ 1.9
CLTCL1P53675 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CLTCL1P53675 AL592071.1-201ENST00000611956 408 ntBASIC26.91■■□□□ 1.9
CLTCL1P53675 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC26.91■■□□□ 1.9
CLTCL1P53675 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLTCL1P53675 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC26.91■■□□□ 1.9
CLTCL1P53675 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC26.91■■□□□ 1.9
CLTCL1P53675 LINC00167-201ENST00000530583 1419 ntBASIC26.91■■□□□ 1.9
CLTCL1P53675 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC26.91■■□□□ 1.9
CLTCL1P53675 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.91■■□□□ 1.9
CLTCL1P53675 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC26.91■■□□□ 1.9
CLTCL1P53675 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLTCL1P53675 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC26.9■■□□□ 1.9
CLTCL1P53675 TSPY19P-201ENST00000418461 509 ntBASIC26.9■■□□□ 1.9
CLTCL1P53675 TSPY18P-201ENST00000441642 509 ntBASIC26.9■■□□□ 1.9
CLTCL1P53675 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CLTCL1P53675 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
CLTCL1P53675 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC26.9■■□□□ 1.9
CLTCL1P53675 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CLTCL1P53675 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CLTCL1P53675 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLTCL1P53675 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLTCL1P53675 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.9■■□□□ 1.9
CLTCL1P53675 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC26.9■■□□□ 1.9
CLTCL1P53675 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC26.9■■□□□ 1.9
CLTCL1P53675 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLTCL1P53675 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CLTCL1P53675 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
CLTCL1P53675 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLTCL1P53675 KRT17P6-201ENST00000453795 1220 ntBASIC26.9■■□□□ 1.9
CLTCL1P53675 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC26.9■■□□□ 1.9
CLTCL1P53675 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC26.9■■□□□ 1.9
CLTCL1P53675 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLTCL1P53675 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CLTCL1P53675 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms