Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX2P50458 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX2P50458 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX2P50458 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.81■□□□□ 0.28
LHX2P50458 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LHX2P50458 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
LHX2P50458 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LHX2P50458 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.8■□□□□ 0.28
LHX2P50458 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.8■□□□□ 0.28
LHX2P50458 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LHX2P50458 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LHX2P50458 STARP1-201ENST00000397973 869 ntBASIC16.8■□□□□ 0.28
LHX2P50458 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 KRT18P38-201ENST00000449496 1282 ntBASIC16.8■□□□□ 0.28
LHX2P50458 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.8■□□□□ 0.28
LHX2P50458 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.8■□□□□ 0.28
LHX2P50458 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.8■□□□□ 0.28
LHX2P50458 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 AC024243.1-201ENST00000609234 778 ntBASIC16.8■□□□□ 0.28
LHX2P50458 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.8■□□□□ 0.28
LHX2P50458 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.8■□□□□ 0.28
LHX2P50458 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.8■□□□□ 0.28
LHX2P50458 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX2P50458 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.79■□□□□ 0.28
LHX2P50458 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.79■□□□□ 0.28
LHX2P50458 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LHX2P50458 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
LHX2P50458 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX2P50458 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.79■□□□□ 0.28
LHX2P50458 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX2P50458 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.79■□□□□ 0.28
LHX2P50458 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LHX2P50458 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.79■□□□□ 0.28
LHX2P50458 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.79■□□□□ 0.28
LHX2P50458 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.79■□□□□ 0.28
LHX2P50458 AC112497.1-201ENST00000624824 639 ntBASIC16.79■□□□□ 0.28
LHX2P50458 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX2P50458 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
LHX2P50458 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX2P50458 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX2P50458 HEIH-201ENST00000623091 1652 ntBASIC16.78■□□□□ 0.28
LHX2P50458 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
LHX2P50458 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LHX2P50458 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.78■□□□□ 0.28
LHX2P50458 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 AL031133.1-201ENST00000406807 723 ntBASIC16.78■□□□□ 0.28
LHX2P50458 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LHX2P50458 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX2P50458 SEC1P-202ENST00000473944 940 ntBASIC16.78■□□□□ 0.28
LHX2P50458 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms