Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HADHAP40939 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HADHAP40939 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.05■□□□□ 0.64
HADHAP40939 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.05■□□□□ 0.64
HADHAP40939 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.05■□□□□ 0.64
HADHAP40939 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HADHAP40939 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.05■□□□□ 0.64
HADHAP40939 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HADHAP40939 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.05■□□□□ 0.64
HADHAP40939 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.05■□□□□ 0.64
HADHAP40939 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.05■□□□□ 0.64
HADHAP40939 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.05■□□□□ 0.64
HADHAP40939 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.05■□□□□ 0.64
HADHAP40939 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.04■□□□□ 0.64
HADHAP40939 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HADHAP40939 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HADHAP40939 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HADHAP40939 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HADHAP40939 KRT8P11-201ENST00000409686 1436 ntBASIC19.04■□□□□ 0.64
HADHAP40939 AL355355.2-201ENST00000442321 338 ntBASIC19.04■□□□□ 0.64
HADHAP40939 FAM207BP-201ENST00000447172 505 ntBASIC19.04■□□□□ 0.64
HADHAP40939 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HADHAP40939 AC116562.2-201ENST00000507042 360 ntBASIC19.04■□□□□ 0.64
HADHAP40939 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.04■□□□□ 0.64
HADHAP40939 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.04■□□□□ 0.64
HADHAP40939 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.04■□□□□ 0.64
HADHAP40939 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.04■□□□□ 0.64
HADHAP40939 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HADHAP40939 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 AL512353.2-201ENST00000448759 1962 ntBASIC19.04■□□□□ 0.64
HADHAP40939 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.04■□□□□ 0.64
HADHAP40939 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HADHAP40939 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.04■□□□□ 0.64
HADHAP40939 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HADHAP40939 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.03■□□□□ 0.64
HADHAP40939 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
HADHAP40939 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.03■□□□□ 0.64
HADHAP40939 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HADHAP40939 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HADHAP40939 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 AC011506.1-201ENST00000474329 610 ntBASIC19.03■□□□□ 0.64
HADHAP40939 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.03■□□□□ 0.64
HADHAP40939 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.03■□□□□ 0.64
HADHAP40939 DGCR10-201ENST00000609839 495 ntBASIC19.03■□□□□ 0.64
HADHAP40939 AC083906.6-201ENST00000641366 219 ntBASIC19.03■□□□□ 0.64
HADHAP40939 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HADHAP40939 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
HADHAP40939 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.03■□□□□ 0.64
HADHAP40939 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.03■□□□□ 0.64
HADHAP40939 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
HADHAP40939 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.03■□□□□ 0.64
HADHAP40939 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHAP40939 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HADHAP40939 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
HADHAP40939 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HADHAP40939 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.02■□□□□ 0.64
HADHAP40939 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.02■□□□□ 0.64
HADHAP40939 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HADHAP40939 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.02■□□□□ 0.64
HADHAP40939 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms