Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TSPY7P-201ENST00000431358 1114 ntBASIC19.84■□□□□ 0.77
RFC1P35251 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.84■□□□□ 0.77
RFC1P35251 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.84■□□□□ 0.77
RFC1P35251 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.84■□□□□ 0.77
RFC1P35251 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.84■□□□□ 0.77
RFC1P35251 AP006294.2-201ENST00000641667 209 ntBASIC19.84■□□□□ 0.77
RFC1P35251 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.84■□□□□ 0.77
RFC1P35251 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
RFC1P35251 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RFC1P35251 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RFC1P35251 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RFC1P35251 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RFC1P35251 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC1P35251 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RFC1P35251 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RFC1P35251 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC1P35251 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC1P35251 AP003071.4-201ENST00000562276 1284 ntBASIC19.83■□□□□ 0.77
RFC1P35251 SLC25A1P4-201ENST00000567977 778 ntBASIC19.83■□□□□ 0.77
RFC1P35251 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.83■□□□□ 0.77
RFC1P35251 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC1P35251 DGCR10-201ENST00000609839 495 ntBASIC19.83■□□□□ 0.77
RFC1P35251 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RFC1P35251 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.83■□□□□ 0.76
RFC1P35251 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RFC1P35251 KRT8P3-201ENST00000519669 1449 ntBASIC19.83■□□□□ 0.76
RFC1P35251 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.83■□□□□ 0.76
RFC1P35251 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.83■□□□□ 0.76
RFC1P35251 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
RFC1P35251 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RFC1P35251 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RFC1P35251 AC096733.2-201ENST00000609937 1394 ntBASIC19.83■□□□□ 0.76
RFC1P35251 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RFC1P35251 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC1P35251 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.82■□□□□ 0.76
RFC1P35251 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RFC1P35251 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC1P35251 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
RFC1P35251 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.82■□□□□ 0.76
RFC1P35251 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC1P35251 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.82■□□□□ 0.76
RFC1P35251 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.82■□□□□ 0.76
RFC1P35251 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC1P35251 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.82■□□□□ 0.76
RFC1P35251 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.82■□□□□ 0.76
RFC1P35251 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.82■□□□□ 0.76
RFC1P35251 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RFC1P35251 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.82■□□□□ 0.76
RFC1P35251 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.82■□□□□ 0.76
RFC1P35251 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC1P35251 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RFC1P35251 AC090340.1-201ENST00000620778 4980 ntBASIC19.82■□□□□ 0.76
RFC1P35251 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RFC1P35251 Z98044.1-201ENST00000632503 1764 ntBASIC19.82■□□□□ 0.76
RFC1P35251 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RFC1P35251 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC1P35251 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.82■□□□□ 0.76
RFC1P35251 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.81■□□□□ 0.76
RFC1P35251 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.81■□□□□ 0.76
RFC1P35251 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.81■□□□□ 0.76
RFC1P35251 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.81■□□□□ 0.76
RFC1P35251 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.81■□□□□ 0.76
RFC1P35251 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFC1P35251 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.81■□□□□ 0.76
RFC1P35251 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.81■□□□□ 0.76
RFC1P35251 AC097488.1-201ENST00000507834 756 ntBASIC19.81■□□□□ 0.76
RFC1P35251 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.81■□□□□ 0.76
RFC1P35251 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.81■□□□□ 0.76
RFC1P35251 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RFC1P35251 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.81■□□□□ 0.76
RFC1P35251 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC1P35251 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC1P35251 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms