Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC26.57■■□□□ 1.84
CPS1P31327 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC26.57■■□□□ 1.84
CPS1P31327 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPS1P31327 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
CPS1P31327 NMU-202ENST00000505262 693 ntTSL 3 BASIC26.57■■□□□ 1.84
CPS1P31327 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC26.57■■□□□ 1.84
CPS1P31327 AC027601.4-201ENST00000611259 610 ntBASIC26.57■■□□□ 1.84
CPS1P31327 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC26.57■■□□□ 1.84
CPS1P31327 AC083906.6-201ENST00000641366 219 ntBASIC26.57■■□□□ 1.84
CPS1P31327 AC079781.4-201ENST00000641908 219 ntBASIC26.57■■□□□ 1.84
CPS1P31327 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPS1P31327 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPS1P31327 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPS1P31327 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPS1P31327 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPS1P31327 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CPS1P31327 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPS1P31327 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPS1P31327 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC26.56■■□□□ 1.84
CPS1P31327 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CPS1P31327 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CPS1P31327 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CPS1P31327 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CPS1P31327 YBX2P1-201ENST00000394192 760 ntBASIC26.56■■□□□ 1.84
CPS1P31327 MED15P5-201ENST00000423150 992 ntBASIC26.56■■□□□ 1.84
CPS1P31327 MCCD1P1-208ENST00000445732 328 ntBASIC26.56■■□□□ 1.84
CPS1P31327 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC26.56■■□□□ 1.84
CPS1P31327 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CPS1P31327 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC26.56■■□□□ 1.84
CPS1P31327 FAM215A-202ENST00000632077 792 ntBASIC26.56■■□□□ 1.84
CPS1P31327 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CPS1P31327 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.56■■□□□ 1.84
CPS1P31327 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CPS1P31327 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CPS1P31327 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CPS1P31327 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPS1P31327 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC26.55■■□□□ 1.84
CPS1P31327 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CPS1P31327 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC26.55■■□□□ 1.84
CPS1P31327 DHDH-204ENST00000523250 634 ntTSL 5 BASIC26.55■■□□□ 1.84
CPS1P31327 RPS15-207ENST00000591032 550 ntTSL 3 BASIC26.55■■□□□ 1.84
CPS1P31327 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC26.55■■□□□ 1.84
CPS1P31327 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPS1P31327 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC26.55■■□□□ 1.84
CPS1P31327 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CPS1P31327 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC26.55■■□□□ 1.84
CPS1P31327 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPS1P31327 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CPS1P31327 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CPS1P31327 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CPS1P31327 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CPS1P31327 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPS1P31327 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPS1P31327 AL591424.1-201ENST00000442569 1213 ntBASIC26.55■■□□□ 1.84
CPS1P31327 AC091607.1-201ENST00000490318 1060 ntBASIC26.55■■□□□ 1.84
CPS1P31327 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC26.55■■□□□ 1.84
CPS1P31327 IGHV3-22-201ENST00000520721 359 ntBASIC26.55■■□□□ 1.84
CPS1P31327 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC26.54■■□□□ 1.84
CPS1P31327 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CPS1P31327 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.54■■□□□ 1.84
CPS1P31327 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
CPS1P31327 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CPS1P31327 FIS1-203ENST00000442303 631 ntTSL 3 BASIC26.54■■□□□ 1.84
CPS1P31327 SCARNA2-201ENST00000458748 420 ntBASIC26.54■■□□□ 1.84
CPS1P31327 RN7SL606P-201ENST00000472779 293 ntBASIC26.54■■□□□ 1.84
CPS1P31327 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC26.54■■□□□ 1.84
CPS1P31327 AL356488.2-201ENST00000602755 427 ntBASIC26.54■■□□□ 1.84
CPS1P31327 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC26.54■■□□□ 1.84
CPS1P31327 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CPS1P31327 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CPS1P31327 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CPS1P31327 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CPS1P31327 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CPS1P31327 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
CPS1P31327 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC26.53■■□□□ 1.84
CPS1P31327 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CPS1P31327 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC26.53■■□□□ 1.84
CPS1P31327 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC26.53■■□□□ 1.84
CPS1P31327 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CPS1P31327 DNAJB3-201ENST00000446806 729 ntBASIC26.53■■□□□ 1.84
CPS1P31327 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CPS1P31327 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CPS1P31327 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CPS1P31327 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CPS1P31327 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CPS1P31327 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CPS1P31327 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CPS1P31327 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC26.52■■□□□ 1.84
CPS1P31327 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CPS1P31327 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CPS1P31327 RPS8P6-201ENST00000426177 609 ntBASIC26.52■■□□□ 1.84
CPS1P31327 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC26.52■■□□□ 1.84
CPS1P31327 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CPS1P31327 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CPS1P31327 BNIP3P18-201ENST00000593976 575 ntBASIC26.52■■□□□ 1.84
CPS1P31327 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CPS1P31327 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC26.52■■□□□ 1.84
CPS1P31327 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CPS1P31327 KRT8P3-201ENST00000519669 1449 ntBASIC26.52■■□□□ 1.84
CPS1P31327 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms