Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
KCNA3P22001 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
KCNA3P22001 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.08■■□□□ 1.28
KCNA3P22001 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.07■■□□□ 1.28
KCNA3P22001 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 MINOS1P3-201ENST00000457048 203 ntBASIC23.07■■□□□ 1.28
KCNA3P22001 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.07■■□□□ 1.28
KCNA3P22001 VENTXP7-201ENST00000475503 772 ntBASIC23.07■■□□□ 1.28
KCNA3P22001 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
KCNA3P22001 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
KCNA3P22001 TREX1-205ENST00000625293 1783 ntBASIC23.06■■□□□ 1.28
KCNA3P22001 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNA3P22001 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNA3P22001 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNA3P22001 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNA3P22001 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNA3P22001 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNA3P22001 MIR564-202ENST00000385049 94 ntBASIC23.06■■□□□ 1.28
KCNA3P22001 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.06■■□□□ 1.28
KCNA3P22001 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
KCNA3P22001 AC132008.2-207ENST00000454517 770 ntBASIC23.06■■□□□ 1.28
KCNA3P22001 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNA3P22001 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNA3P22001 AC116407.3-201ENST00000623905 1129 ntBASIC23.06■■□□□ 1.28
KCNA3P22001 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
KCNA3P22001 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
KCNA3P22001 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNA3P22001 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNA3P22001 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNA3P22001 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.06■■□□□ 1.28
KCNA3P22001 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNA3P22001 AL391422.3-201ENST00000603791 2761 ntBASIC23.06■■□□□ 1.28
KCNA3P22001 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
KCNA3P22001 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
KCNA3P22001 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 AL353692.3-201ENST00000407031 1396 ntBASIC23.05■■□□□ 1.28
KCNA3P22001 ZNF259P1-201ENST00000407656 1365 ntBASIC23.05■■□□□ 1.28
KCNA3P22001 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
KCNA3P22001 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNA3P22001 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNA3P22001 RCC2P3-201ENST00000418112 1537 ntBASIC23.05■■□□□ 1.28
KCNA3P22001 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.05■■□□□ 1.28
KCNA3P22001 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNA3P22001 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.05■■□□□ 1.28
KCNA3P22001 AC024563.2-201ENST00000603282 481 ntBASIC23.05■■□□□ 1.28
KCNA3P22001 AC008608.2-201ENST00000606089 416 ntBASIC23.05■■□□□ 1.28
KCNA3P22001 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNA3P22001 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNA3P22001 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNA3P22001 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.05■■□□□ 1.28
KCNA3P22001 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNA3P22001 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNA3P22001 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.04■■□□□ 1.28
KCNA3P22001 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNA3P22001 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
KCNA3P22001 AL162377.1-201ENST00000618844 1793 ntBASIC23.04■■□□□ 1.28
KCNA3P22001 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNA3P22001 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNA3P22001 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNA3P22001 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNA3P22001 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.04■■□□□ 1.28
KCNA3P22001 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
KCNA3P22001 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNA3P22001 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNA3P22001 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.04■■□□□ 1.28
KCNA3P22001 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.04■■□□□ 1.28
KCNA3P22001 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC23.04■■□□□ 1.28
KCNA3P22001 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNA3P22001 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.04■■□□□ 1.28
KCNA3P22001 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNA3P22001 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNA3P22001 AL512353.2-201ENST00000448759 1962 ntBASIC23.03■■□□□ 1.28
KCNA3P22001 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNA3P22001 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNA3P22001 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNA3P22001 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNA3P22001 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms