Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A2P13942 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
COL11A2P13942 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A2P13942 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
COL11A2P13942 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.02■■□□□ 1.28
COL11A2P13942 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.02■■□□□ 1.28
COL11A2P13942 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
COL11A2P13942 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
COL11A2P13942 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.02■■□□□ 1.28
COL11A2P13942 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.02■■□□□ 1.28
COL11A2P13942 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.02■■□□□ 1.28
COL11A2P13942 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.02■■□□□ 1.28
COL11A2P13942 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.02■■□□□ 1.28
COL11A2P13942 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A2P13942 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.02■■□□□ 1.28
COL11A2P13942 AC024563.2-201ENST00000603282 481 ntBASIC23.02■■□□□ 1.28
COL11A2P13942 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.01■■□□□ 1.27
COL11A2P13942 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.01■■□□□ 1.27
COL11A2P13942 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.01■■□□□ 1.27
COL11A2P13942 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
COL11A2P13942 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
COL11A2P13942 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.01■■□□□ 1.27
COL11A2P13942 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.01■■□□□ 1.27
COL11A2P13942 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
COL11A2P13942 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.01■■□□□ 1.27
COL11A2P13942 KRT18P58-201ENST00000527480 1120 ntBASIC23.01■■□□□ 1.27
COL11A2P13942 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.01■■□□□ 1.27
COL11A2P13942 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
COL11A2P13942 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 KRT89P-201ENST00000620027 1478 ntBASIC23.01■■□□□ 1.27
COL11A2P13942 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A2P13942 AC034236.2-201ENST00000606662 1610 ntBASIC23.01■■□□□ 1.27
COL11A2P13942 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL11A2P13942 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL11A2P13942 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23■■□□□ 1.27
COL11A2P13942 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL11A2P13942 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23■■□□□ 1.27
COL11A2P13942 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
COL11A2P13942 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC23■■□□□ 1.27
COL11A2P13942 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
COL11A2P13942 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23■■□□□ 1.27
COL11A2P13942 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23■■□□□ 1.27
COL11A2P13942 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23■■□□□ 1.27
COL11A2P13942 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL11A2P13942 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23■■□□□ 1.27
COL11A2P13942 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL11A2P13942 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
COL11A2P13942 AC006333.2-201ENST00000607957 2099 ntBASIC23■■□□□ 1.27
COL11A2P13942 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
COL11A2P13942 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.99■■□□□ 1.27
COL11A2P13942 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.99■■□□□ 1.27
COL11A2P13942 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.99■■□□□ 1.27
COL11A2P13942 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.99■■□□□ 1.27
COL11A2P13942 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 AC096582.2-201ENST00000510860 516 ntBASIC22.99■■□□□ 1.27
COL11A2P13942 POLD2P1-201ENST00000511220 997 ntBASIC22.99■■□□□ 1.27
COL11A2P13942 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.99■■□□□ 1.27
COL11A2P13942 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.99■■□□□ 1.27
COL11A2P13942 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.99■■□□□ 1.27
COL11A2P13942 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.99■■□□□ 1.27
COL11A2P13942 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.99■■□□□ 1.27
COL11A2P13942 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.99■■□□□ 1.27
COL11A2P13942 AL031284.1-201ENST00000419297 478 ntBASIC22.99■■□□□ 1.27
COL11A2P13942 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.99■■□□□ 1.27
COL11A2P13942 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
COL11A2P13942 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A2P13942 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.99■■□□□ 1.27
COL11A2P13942 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
COL11A2P13942 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms