Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.27■■□□□ 1
HOXC6P09630 AC090616.6-201ENST00000582640 721 ntBASIC21.27■■□□□ 1
HOXC6P09630 AC010240.3-201ENST00000607688 395 ntBASIC21.27■■□□□ 1
HOXC6P09630 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.27■■□□□ 1
HOXC6P09630 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HOXC6P09630 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.27■■□□□ 1
HOXC6P09630 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC6P09630 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC6P09630 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC6P09630 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
HOXC6P09630 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HOXC6P09630 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HOXC6P09630 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
HOXC6P09630 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
HOXC6P09630 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.26■□□□□ 0.99
HOXC6P09630 Z83836.1-201ENST00000624605 1642 ntBASIC21.26■□□□□ 0.99
HOXC6P09630 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC6P09630 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC6P09630 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC6P09630 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HOXC6P09630 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.26■□□□□ 0.99
HOXC6P09630 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HOXC6P09630 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC6P09630 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HOXC6P09630 KRT18P23-201ENST00000435622 1283 ntBASIC21.26■□□□□ 0.99
HOXC6P09630 AC079781.3-201ENST00000449110 356 ntBASIC21.26■□□□□ 0.99
HOXC6P09630 FOSL1P1-201ENST00000511041 816 ntBASIC21.26■□□□□ 0.99
HOXC6P09630 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.26■□□□□ 0.99
HOXC6P09630 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC6P09630 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.26■□□□□ 0.99
HOXC6P09630 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.26■□□□□ 0.99
HOXC6P09630 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.26■□□□□ 0.99
HOXC6P09630 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC6P09630 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC6P09630 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.26■□□□□ 0.99
HOXC6P09630 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HOXC6P09630 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.26■□□□□ 0.99
HOXC6P09630 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC6P09630 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.25■□□□□ 0.99
HOXC6P09630 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.25■□□□□ 0.99
HOXC6P09630 AC073130.3-201ENST00000624389 2278 ntBASIC21.25■□□□□ 0.99
HOXC6P09630 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.25■□□□□ 0.99
HOXC6P09630 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HOXC6P09630 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.25■□□□□ 0.99
HOXC6P09630 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.25■□□□□ 0.99
HOXC6P09630 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.25■□□□□ 0.99
HOXC6P09630 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.25■□□□□ 0.99
HOXC6P09630 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.25■□□□□ 0.99
HOXC6P09630 LINC01711-201ENST00000598340 967 ntBASIC21.25■□□□□ 0.99
HOXC6P09630 AL390719.2-201ENST00000606993 987 ntBASIC21.25■□□□□ 0.99
HOXC6P09630 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.25■□□□□ 0.99
HOXC6P09630 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.25■□□□□ 0.99
HOXC6P09630 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.25■□□□□ 0.99
HOXC6P09630 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HOXC6P09630 AL512353.2-201ENST00000448759 1962 ntBASIC21.25■□□□□ 0.99
HOXC6P09630 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC6P09630 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.24■□□□□ 0.99
HOXC6P09630 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
HOXC6P09630 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.24■□□□□ 0.99
HOXC6P09630 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.24■□□□□ 0.99
HOXC6P09630 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.24■□□□□ 0.99
HOXC6P09630 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.24■□□□□ 0.99
HOXC6P09630 AC005332.3-201ENST00000589904 676 ntBASIC21.24■□□□□ 0.99
HOXC6P09630 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.24■□□□□ 0.99
HOXC6P09630 PCDHAC2-203ENST00000615316 3011 ntBASIC21.24■□□□□ 0.99
HOXC6P09630 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC6P09630 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HOXC6P09630 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.24■□□□□ 0.99
HOXC6P09630 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HOXC6P09630 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.23■□□□□ 0.99
HOXC6P09630 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.23■□□□□ 0.99
HOXC6P09630 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC6P09630 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC6P09630 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC6P09630 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HOXC6P09630 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms