Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
PDGFAP04085 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
PDGFAP04085 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
PDGFAP04085 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 STARP1-201ENST00000397973 869 ntBASIC17.58■□□□□ 0.4
PDGFAP04085 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFAP04085 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.58■□□□□ 0.4
PDGFAP04085 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFAP04085 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFAP04085 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFAP04085 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.58■□□□□ 0.4
PDGFAP04085 MIR4674-201ENST00000582457 87 ntBASIC17.58■□□□□ 0.4
PDGFAP04085 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFAP04085 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFAP04085 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.58■□□□□ 0.4
PDGFAP04085 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.58■□□□□ 0.4
PDGFAP04085 TNXA-203ENST00000507684 2038 ntBASIC17.58■□□□□ 0.4
PDGFAP04085 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PDGFAP04085 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.58■□□□□ 0.4
PDGFAP04085 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.57■□□□□ 0.4
PDGFAP04085 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 AC120498.9-201ENST00000339021 3867 ntBASIC17.57■□□□□ 0.4
PDGFAP04085 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.57■□□□□ 0.4
PDGFAP04085 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFAP04085 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PDGFAP04085 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFAP04085 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.57■□□□□ 0.4
PDGFAP04085 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFAP04085 TSPY21P-201ENST00000433481 731 ntBASIC17.57■□□□□ 0.4
PDGFAP04085 TSPY23P-201ENST00000440136 739 ntBASIC17.57■□□□□ 0.4
PDGFAP04085 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.57■□□□□ 0.4
PDGFAP04085 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFAP04085 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDGFAP04085 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFAP04085 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFAP04085 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDGFAP04085 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFAP04085 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.57■□□□□ 0.4
PDGFAP04085 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PDGFAP04085 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFAP04085 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFAP04085 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDGFAP04085 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDGFAP04085 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PDGFAP04085 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
PDGFAP04085 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 AP000523.1-201ENST00000398242 1049 ntBASIC17.56■□□□□ 0.4
PDGFAP04085 ATP5G2P1-201ENST00000433580 426 ntBASIC17.56■□□□□ 0.4
PDGFAP04085 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.56■□□□□ 0.4
PDGFAP04085 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.56■□□□□ 0.4
PDGFAP04085 NEK4P2-201ENST00000580004 1012 ntBASIC17.56■□□□□ 0.4
PDGFAP04085 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.56■□□□□ 0.4
PDGFAP04085 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDGFAP04085 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 GABARAPL3-202ENST00000624044 1851 ntBASIC17.56■□□□□ 0.4
PDGFAP04085 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PDGFAP04085 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
PDGFAP04085 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDGFAP04085 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.56■□□□□ 0.4
PDGFAP04085 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDGFAP04085 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms