Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
GGPS1O95749 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.13■□□□□ 0.97
GGPS1O95749 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.13■□□□□ 0.97
GGPS1O95749 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
GGPS1O95749 SPDYE13P-201ENST00000445314 798 ntBASIC21.13■□□□□ 0.97
GGPS1O95749 AC092597.1-201ENST00000487352 616 ntBASIC21.13■□□□□ 0.97
GGPS1O95749 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
GGPS1O95749 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
GGPS1O95749 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 IRX1P1-201ENST00000438849 1838 ntBASIC21.13■□□□□ 0.97
GGPS1O95749 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
GGPS1O95749 FEM1AP3-201ENST00000403722 1741 ntBASIC21.12■□□□□ 0.97
GGPS1O95749 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GGPS1O95749 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.12■□□□□ 0.97
GGPS1O95749 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GGPS1O95749 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.12■□□□□ 0.97
GGPS1O95749 HBZP1-201ENST00000354915 429 ntBASIC21.12■□□□□ 0.97
GGPS1O95749 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GGPS1O95749 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.12■□□□□ 0.97
GGPS1O95749 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GGPS1O95749 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GGPS1O95749 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
GGPS1O95749 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.12■□□□□ 0.97
GGPS1O95749 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.12■□□□□ 0.97
GGPS1O95749 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.12■□□□□ 0.97
GGPS1O95749 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GGPS1O95749 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
GGPS1O95749 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GGPS1O95749 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GGPS1O95749 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GGPS1O95749 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.12■□□□□ 0.97
GGPS1O95749 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GGPS1O95749 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
GGPS1O95749 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.11■□□□□ 0.97
GGPS1O95749 AIRN-201ENST00000601203 4374 ntBASIC21.11■□□□□ 0.97
GGPS1O95749 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
GGPS1O95749 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.11■□□□□ 0.97
GGPS1O95749 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
GGPS1O95749 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.11■□□□□ 0.97
GGPS1O95749 SEC1P-202ENST00000473944 940 ntBASIC21.11■□□□□ 0.97
GGPS1O95749 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.11■□□□□ 0.97
GGPS1O95749 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.11■□□□□ 0.97
GGPS1O95749 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.11■□□□□ 0.97
GGPS1O95749 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.11■□□□□ 0.97
GGPS1O95749 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GGPS1O95749 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.11■□□□□ 0.97
GGPS1O95749 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.11■□□□□ 0.97
GGPS1O95749 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.11■□□□□ 0.97
GGPS1O95749 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.11■□□□□ 0.97
GGPS1O95749 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.1■□□□□ 0.97
GGPS1O95749 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.1■□□□□ 0.97
GGPS1O95749 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GGPS1O95749 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GGPS1O95749 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GGPS1O95749 AL109659.2-201ENST00000606809 1674 ntBASIC21.1■□□□□ 0.97
GGPS1O95749 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GGPS1O95749 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.1■□□□□ 0.97
GGPS1O95749 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.1■□□□□ 0.97
GGPS1O95749 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.1■□□□□ 0.97
GGPS1O95749 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.1■□□□□ 0.97
GGPS1O95749 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.1■□□□□ 0.97
GGPS1O95749 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.1■□□□□ 0.97
GGPS1O95749 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GGPS1O95749 AC112497.1-201ENST00000624824 639 ntBASIC21.1■□□□□ 0.97
GGPS1O95749 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GGPS1O95749 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GGPS1O95749 AC008556.1-201ENST00000610908 2040 ntBASIC21.1■□□□□ 0.97
GGPS1O95749 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GGPS1O95749 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.1■□□□□ 0.97
GGPS1O95749 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.1■□□□□ 0.97
GGPS1O95749 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GGPS1O95749 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.1■□□□□ 0.97
GGPS1O95749 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.09■□□□□ 0.97
GGPS1O95749 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 KRT18P56-201ENST00000507275 550 ntBASIC21.09■□□□□ 0.97
GGPS1O95749 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms