Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.94■□□□□ 0.62
VAPBO95292 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.93■□□□□ 0.62
VAPBO95292 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VAPBO95292 LETM1P2-201ENST00000597330 2178 ntBASIC18.93■□□□□ 0.62
VAPBO95292 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VAPBO95292 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.93■□□□□ 0.62
VAPBO95292 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.93■□□□□ 0.62
VAPBO95292 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.93■□□□□ 0.62
VAPBO95292 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.93■□□□□ 0.62
VAPBO95292 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.93■□□□□ 0.62
VAPBO95292 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VAPBO95292 AC098590.1-201ENST00000468126 897 ntBASIC18.93■□□□□ 0.62
VAPBO95292 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.93■□□□□ 0.62
VAPBO95292 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VAPBO95292 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.93■□□□□ 0.62
VAPBO95292 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.93■□□□□ 0.62
VAPBO95292 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
VAPBO95292 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
VAPBO95292 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VAPBO95292 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VAPBO95292 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.93■□□□□ 0.62
VAPBO95292 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VAPBO95292 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VAPBO95292 FAM197Y1-201ENST00000421178 764 ntBASIC18.92■□□□□ 0.62
VAPBO95292 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.92■□□□□ 0.62
VAPBO95292 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 AL158047.1-201ENST00000445918 881 ntBASIC18.92■□□□□ 0.62
VAPBO95292 AC011506.1-201ENST00000474329 610 ntBASIC18.92■□□□□ 0.62
VAPBO95292 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.92■□□□□ 0.62
VAPBO95292 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.92■□□□□ 0.62
VAPBO95292 AC130371.2-201ENST00000619443 611 ntBASIC18.92■□□□□ 0.62
VAPBO95292 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.92■□□□□ 0.62
VAPBO95292 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.92■□□□□ 0.62
VAPBO95292 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VAPBO95292 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.92■□□□□ 0.62
VAPBO95292 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VAPBO95292 AC005082.1-201ENST00000413042 2259 ntBASIC18.91■□□□□ 0.62
VAPBO95292 AL135905.2-201ENST00000584934 1404 ntBASIC18.91■□□□□ 0.62
VAPBO95292 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VAPBO95292 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.91■□□□□ 0.62
VAPBO95292 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VAPBO95292 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VAPBO95292 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VAPBO95292 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VAPBO95292 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.91■□□□□ 0.62
VAPBO95292 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VAPBO95292 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.91■□□□□ 0.62
VAPBO95292 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.91■□□□□ 0.62
VAPBO95292 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.91■□□□□ 0.62
VAPBO95292 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VAPBO95292 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VAPBO95292 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VAPBO95292 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VAPBO95292 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.91■□□□□ 0.62
VAPBO95292 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.91■□□□□ 0.62
VAPBO95292 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.91■□□□□ 0.62
VAPBO95292 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VAPBO95292 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.9■□□□□ 0.62
VAPBO95292 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VAPBO95292 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.9■□□□□ 0.62
VAPBO95292 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.9■□□□□ 0.62
VAPBO95292 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
VAPBO95292 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms