Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ALX3O95076 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.63■□□□□ 0.25
ALX3O95076 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ALX3O95076 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.63■□□□□ 0.25
ALX3O95076 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.63■□□□□ 0.25
ALX3O95076 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ALX3O95076 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
ALX3O95076 AC018695.7-201ENST00000624587 2492 ntBASIC16.63■□□□□ 0.25
ALX3O95076 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.62■□□□□ 0.25
ALX3O95076 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ALX3O95076 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ALX3O95076 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ALX3O95076 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.62■□□□□ 0.25
ALX3O95076 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 MIR4758-201ENST00000577688 71 ntBASIC16.62■□□□□ 0.25
ALX3O95076 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ALX3O95076 AC006557.6-201ENST00000623071 864 ntBASIC16.62■□□□□ 0.25
ALX3O95076 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.62■□□□□ 0.25
ALX3O95076 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ALX3O95076 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.62■□□□□ 0.25
ALX3O95076 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.62■□□□□ 0.25
ALX3O95076 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALX3O95076 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ALX3O95076 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.61■□□□□ 0.25
ALX3O95076 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.61■□□□□ 0.25
ALX3O95076 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 BCL2-203ENST00000589955 5011 ntBASIC16.61■□□□□ 0.25
ALX3O95076 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ALX3O95076 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ALX3O95076 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.61■□□□□ 0.25
ALX3O95076 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.61■□□□□ 0.25
ALX3O95076 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.61■□□□□ 0.25
ALX3O95076 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 MYC-209ENST00000641252 345 ntBASIC16.61■□□□□ 0.25
ALX3O95076 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.61■□□□□ 0.25
ALX3O95076 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ALX3O95076 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ALX3O95076 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALX3O95076 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.6■□□□□ 0.25
ALX3O95076 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms