Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.83■□□□□ 0.93
CLSTN1O94985 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLSTN1O94985 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLSTN1O94985 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.83■□□□□ 0.93
CLSTN1O94985 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CLSTN1O94985 RPS2P55-201ENST00000397318 883 ntBASIC20.83■□□□□ 0.93
CLSTN1O94985 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.83■□□□□ 0.93
CLSTN1O94985 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.83■□□□□ 0.93
CLSTN1O94985 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLSTN1O94985 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.83■□□□□ 0.93
CLSTN1O94985 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLSTN1O94985 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.83■□□□□ 0.93
CLSTN1O94985 AC107956.1-201ENST00000494359 873 ntBASIC20.83■□□□□ 0.93
CLSTN1O94985 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.83■□□□□ 0.93
CLSTN1O94985 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CLSTN1O94985 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CLSTN1O94985 HLA-A-209ENST00000638375 975 ntBASIC20.83■□□□□ 0.93
CLSTN1O94985 KRT16P1-201ENST00000399124 1418 ntBASIC20.83■□□□□ 0.93
CLSTN1O94985 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLSTN1O94985 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.83■□□□□ 0.92
CLSTN1O94985 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLSTN1O94985 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CLSTN1O94985 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.83■□□□□ 0.92
CLSTN1O94985 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLSTN1O94985 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLSTN1O94985 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.83■□□□□ 0.92
CLSTN1O94985 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CLSTN1O94985 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLSTN1O94985 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLSTN1O94985 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLSTN1O94985 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CLSTN1O94985 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLSTN1O94985 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLSTN1O94985 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.82■□□□□ 0.92
CLSTN1O94985 AC073195.1-201ENST00000607241 877 ntBASIC20.82■□□□□ 0.92
CLSTN1O94985 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLSTN1O94985 AC131212.4-201ENST00000623606 975 ntBASIC20.82■□□□□ 0.92
CLSTN1O94985 AC093503.3-201ENST00000624917 2352 ntBASIC20.82■□□□□ 0.92
CLSTN1O94985 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLSTN1O94985 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLSTN1O94985 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CLSTN1O94985 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLSTN1O94985 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.82■□□□□ 0.92
CLSTN1O94985 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLSTN1O94985 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CLSTN1O94985 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLSTN1O94985 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
CLSTN1O94985 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CLSTN1O94985 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.81■□□□□ 0.92
CLSTN1O94985 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.81■□□□□ 0.92
CLSTN1O94985 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.81■□□□□ 0.92
CLSTN1O94985 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.81■□□□□ 0.92
CLSTN1O94985 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.81■□□□□ 0.92
CLSTN1O94985 AL160286.2-201ENST00000567150 934 ntBASIC20.81■□□□□ 0.92
CLSTN1O94985 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.81■□□□□ 0.92
CLSTN1O94985 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.81■□□□□ 0.92
CLSTN1O94985 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.81■□□□□ 0.92
CLSTN1O94985 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLSTN1O94985 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.8■□□□□ 0.92
CLSTN1O94985 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.8■□□□□ 0.92
CLSTN1O94985 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLSTN1O94985 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLSTN1O94985 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.8■□□□□ 0.92
CLSTN1O94985 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.8■□□□□ 0.92
CLSTN1O94985 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.8■□□□□ 0.92
CLSTN1O94985 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 CD177P1-201ENST00000606252 935 ntBASIC20.8■□□□□ 0.92
CLSTN1O94985 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.8■□□□□ 0.92
CLSTN1O94985 AC066615.1-201ENST00000640911 628 ntBASIC20.8■□□□□ 0.92
CLSTN1O94985 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CLSTN1O94985 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLSTN1O94985 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 AL138781.2-201ENST00000617896 1843 ntBASIC20.8■□□□□ 0.92
CLSTN1O94985 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLSTN1O94985 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLSTN1O94985 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms