Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC066615.1-201ENST00000640911 628 ntBASIC19.06■□□□□ 0.64
USP1O94782 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
USP1O94782 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
USP1O94782 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP1O94782 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP1O94782 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP1O94782 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
USP1O94782 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.05■□□□□ 0.64
USP1O94782 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.05■□□□□ 0.64
USP1O94782 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 AC004980.1-204ENST00000429707 299 ntBASIC19.05■□□□□ 0.64
USP1O94782 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.05■□□□□ 0.64
USP1O94782 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.05■□□□□ 0.64
USP1O94782 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
USP1O94782 AL353708.3-201ENST00000610272 989 ntBASIC19.05■□□□□ 0.64
USP1O94782 AC131212.4-201ENST00000623606 975 ntBASIC19.05■□□□□ 0.64
USP1O94782 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP1O94782 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USP1O94782 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.05■□□□□ 0.64
USP1O94782 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.04■□□□□ 0.64
USP1O94782 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.04■□□□□ 0.64
USP1O94782 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.04■□□□□ 0.64
USP1O94782 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 PRORSD1P-201ENST00000295112 541 ntBASIC19.04■□□□□ 0.64
USP1O94782 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.04■□□□□ 0.64
USP1O94782 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.04■□□□□ 0.64
USP1O94782 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
USP1O94782 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.04■□□□□ 0.64
USP1O94782 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.04■□□□□ 0.64
USP1O94782 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
USP1O94782 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP1O94782 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
USP1O94782 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.03■□□□□ 0.64
USP1O94782 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 KRT8P11-201ENST00000409686 1436 ntBASIC19.03■□□□□ 0.64
USP1O94782 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.03■□□□□ 0.64
USP1O94782 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.03■□□□□ 0.64
USP1O94782 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
USP1O94782 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.03■□□□□ 0.64
USP1O94782 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.03■□□□□ 0.64
USP1O94782 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.03■□□□□ 0.64
USP1O94782 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.03■□□□□ 0.64
USP1O94782 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.03■□□□□ 0.64
USP1O94782 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
USP1O94782 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.03■□□□□ 0.64
USP1O94782 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.03■□□□□ 0.64
USP1O94782 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
USP1O94782 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.03■□□□□ 0.64
USP1O94782 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP1O94782 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.02■□□□□ 0.64
USP1O94782 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.02■□□□□ 0.64
USP1O94782 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms