Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.87■□□□□ 0.61
GPC4O75487 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.87■□□□□ 0.61
GPC4O75487 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.87■□□□□ 0.61
GPC4O75487 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.87■□□□□ 0.61
GPC4O75487 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.87■□□□□ 0.61
GPC4O75487 CR392000.1-201ENST00000624770 1228 ntBASIC18.87■□□□□ 0.61
GPC4O75487 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.87■□□□□ 0.61
GPC4O75487 AL049637.2-201ENST00000641778 930 ntBASIC18.87■□□□□ 0.61
GPC4O75487 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
GPC4O75487 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC4O75487 AL161938.1-201ENST00000569833 2180 ntBASIC18.86■□□□□ 0.61
GPC4O75487 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC4O75487 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GPC4O75487 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC4O75487 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.86■□□□□ 0.61
GPC4O75487 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC4O75487 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC4O75487 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GPC4O75487 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC4O75487 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.86■□□□□ 0.61
GPC4O75487 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GPC4O75487 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.86■□□□□ 0.61
GPC4O75487 CD177P1-201ENST00000606252 935 ntBASIC18.86■□□□□ 0.61
GPC4O75487 AP001412.1-201ENST00000608405 714 ntBASIC18.86■□□□□ 0.61
GPC4O75487 AC113410.3-201ENST00000623366 203 ntBASIC18.86■□□□□ 0.61
GPC4O75487 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.86■□□□□ 0.61
GPC4O75487 AP006294.2-201ENST00000641667 209 ntBASIC18.86■□□□□ 0.61
GPC4O75487 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.86■□□□□ 0.61
GPC4O75487 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.86■□□□□ 0.61
GPC4O75487 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
GPC4O75487 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC4O75487 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC4O75487 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GPC4O75487 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 TEX21P-204ENST00000641479 1693 ntBASIC18.85■□□□□ 0.61
GPC4O75487 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GPC4O75487 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GPC4O75487 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 CROCCP3-202ENST00000420820 1947 ntBASIC18.85■□□□□ 0.61
GPC4O75487 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.85■□□□□ 0.61
GPC4O75487 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 FAM197Y1-201ENST00000421178 764 ntBASIC18.85■□□□□ 0.61
GPC4O75487 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 AC026271.3-201ENST00000571884 352 ntBASIC18.85■□□□□ 0.61
GPC4O75487 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.85■□□□□ 0.61
GPC4O75487 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 AL031985.4-201ENST00000642138 673 ntBASIC18.85■□□□□ 0.61
GPC4O75487 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GPC4O75487 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GPC4O75487 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC4O75487 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC4O75487 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GPC4O75487 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC4O75487 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC4O75487 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 AC141586.3-201ENST00000562166 1838 ntBASIC18.84■□□□□ 0.61
GPC4O75487 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GPC4O75487 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GPC4O75487 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
GPC4O75487 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms