Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
LRCH4O75427 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LRCH4O75427 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRCH4O75427 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
LRCH4O75427 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRCH4O75427 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.61■□□□□ 0.73
LRCH4O75427 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRCH4O75427 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRCH4O75427 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRCH4O75427 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRCH4O75427 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.61■□□□□ 0.73
LRCH4O75427 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 AL499627.1-201ENST00000569373 2188 ntBASIC19.6■□□□□ 0.73
LRCH4O75427 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.6■□□□□ 0.73
LRCH4O75427 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LRCH4O75427 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LRCH4O75427 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.6■□□□□ 0.73
LRCH4O75427 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.6■□□□□ 0.73
LRCH4O75427 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRCH4O75427 AC090164.3-201ENST00000610780 2143 ntBASIC19.6■□□□□ 0.73
LRCH4O75427 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LRCH4O75427 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LRCH4O75427 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.59■□□□□ 0.73
LRCH4O75427 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRCH4O75427 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.59■□□□□ 0.73
LRCH4O75427 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.59■□□□□ 0.73
LRCH4O75427 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRCH4O75427 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.59■□□□□ 0.73
LRCH4O75427 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.59■□□□□ 0.73
LRCH4O75427 AL357033.4-201ENST00000617703 1807 ntBASIC19.59■□□□□ 0.73
LRCH4O75427 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRCH4O75427 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRCH4O75427 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.59■□□□□ 0.73
LRCH4O75427 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRCH4O75427 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.59■□□□□ 0.73
LRCH4O75427 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.59■□□□□ 0.73
LRCH4O75427 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRCH4O75427 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.58■□□□□ 0.73
LRCH4O75427 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRCH4O75427 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.58■□□□□ 0.73
LRCH4O75427 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
LRCH4O75427 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
LRCH4O75427 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
LRCH4O75427 CRYGFP-201ENST00000418459 633 ntBASIC19.58■□□□□ 0.72
LRCH4O75427 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 RBM17P1-201ENST00000453646 1190 ntBASIC19.58■□□□□ 0.72
LRCH4O75427 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.58■□□□□ 0.72
LRCH4O75427 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.58■□□□□ 0.72
LRCH4O75427 AP005242.2-201ENST00000580065 1175 ntBASIC19.58■□□□□ 0.72
LRCH4O75427 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 AC126763.1-201ENST00000552015 2118 ntBASIC19.58■□□□□ 0.72
LRCH4O75427 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LRCH4O75427 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LRCH4O75427 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.58■□□□□ 0.72
LRCH4O75427 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRCH4O75427 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
LRCH4O75427 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH4O75427 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms