Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.88■□□□□ 0.45
PROM1O43490 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.88■□□□□ 0.45
PROM1O43490 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.88■□□□□ 0.45
PROM1O43490 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.88■□□□□ 0.45
PROM1O43490 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PROM1O43490 CRYGFP-201ENST00000418459 633 ntBASIC17.88■□□□□ 0.45
PROM1O43490 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.88■□□□□ 0.45
PROM1O43490 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.88■□□□□ 0.45
PROM1O43490 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
PROM1O43490 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PROM1O43490 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.88■□□□□ 0.45
PROM1O43490 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.88■□□□□ 0.45
PROM1O43490 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.88■□□□□ 0.45
PROM1O43490 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 AC079598.2-202ENST00000546624 1451 ntBASIC17.88■□□□□ 0.45
PROM1O43490 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.88■□□□□ 0.45
PROM1O43490 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.87■□□□□ 0.45
PROM1O43490 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.87■□□□□ 0.45
PROM1O43490 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PROM1O43490 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.87■□□□□ 0.45
PROM1O43490 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.87■□□□□ 0.45
PROM1O43490 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.87■□□□□ 0.45
PROM1O43490 AL355075.4-201ENST00000554988 638 ntBASIC17.87■□□□□ 0.45
PROM1O43490 AP005242.2-201ENST00000580065 1175 ntBASIC17.87■□□□□ 0.45
PROM1O43490 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.87■□□□□ 0.45
PROM1O43490 CROCCP3-202ENST00000420820 1947 ntBASIC17.87■□□□□ 0.45
PROM1O43490 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.87■□□□□ 0.45
PROM1O43490 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PROM1O43490 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PROM1O43490 AC120498.9-201ENST00000339021 3867 ntBASIC17.87■□□□□ 0.45
PROM1O43490 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PROM1O43490 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PROM1O43490 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.87■□□□□ 0.45
PROM1O43490 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.87■□□□□ 0.45
PROM1O43490 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PROM1O43490 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PROM1O43490 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PROM1O43490 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 FAM210CP-201ENST00000445714 574 ntBASIC17.86■□□□□ 0.45
PROM1O43490 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.86■□□□□ 0.45
PROM1O43490 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.86■□□□□ 0.45
PROM1O43490 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.86■□□□□ 0.45
PROM1O43490 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.86■□□□□ 0.45
PROM1O43490 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.86■□□□□ 0.45
PROM1O43490 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.86■□□□□ 0.45
PROM1O43490 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.86■□□□□ 0.45
PROM1O43490 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PROM1O43490 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PROM1O43490 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PROM1O43490 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PROM1O43490 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PROM1O43490 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms