Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATP2A1O14983 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP2A1O14983 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP2A1O14983 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP2A1O14983 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATP2A1O14983 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A1O14983 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A1O14983 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A1O14983 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A1O14983 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.55■■□□□ 1.04
ATP2A1O14983 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A1O14983 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.55■■□□□ 1.04
ATP2A1O14983 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ATP2A1O14983 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.55■■□□□ 1.04
ATP2A1O14983 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ATP2A1O14983 KRT8P32-201ENST00000512863 1461 ntBASIC21.55■■□□□ 1.04
ATP2A1O14983 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A1O14983 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
ATP2A1O14983 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A1O14983 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A1O14983 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.55■■□□□ 1.04
ATP2A1O14983 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A1O14983 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.55■■□□□ 1.04
ATP2A1O14983 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ATP2A1O14983 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
ATP2A1O14983 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ATP2A1O14983 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP2A1O14983 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP2A1O14983 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ATP2A1O14983 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP2A1O14983 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.54■■□□□ 1.04
ATP2A1O14983 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP2A1O14983 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.54■■□□□ 1.04
ATP2A1O14983 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.54■■□□□ 1.04
ATP2A1O14983 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.54■■□□□ 1.04
ATP2A1O14983 AL157888.1-201ENST00000631930 593 ntBASIC21.54■■□□□ 1.04
ATP2A1O14983 AC008556.1-201ENST00000610908 2040 ntBASIC21.54■■□□□ 1.04
ATP2A1O14983 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP2A1O14983 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ATP2A1O14983 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ATP2A1O14983 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ATP2A1O14983 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A1O14983 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP2A1O14983 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
ATP2A1O14983 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.53■■□□□ 1.04
ATP2A1O14983 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.53■■□□□ 1.04
ATP2A1O14983 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP2A1O14983 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.53■■□□□ 1.04
ATP2A1O14983 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP2A1O14983 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 AC104390.1-201ENST00000555663 520 ntBASIC21.53■■□□□ 1.04
ATP2A1O14983 AC011498.5-201ENST00000592027 486 ntBASIC21.53■■□□□ 1.04
ATP2A1O14983 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP2A1O14983 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ATP2A1O14983 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP2A1O14983 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ATP2A1O14983 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP2A1O14983 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A1O14983 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A1O14983 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A1O14983 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A1O14983 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A1O14983 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A1O14983 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ATP2A1O14983 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
ATP2A1O14983 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.52■■□□□ 1.04
ATP2A1O14983 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
ATP2A1O14983 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A1O14983 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.52■■□□□ 1.04
ATP2A1O14983 CLEC4GP1-201ENST00000596555 870 ntBASIC21.52■■□□□ 1.04
ATP2A1O14983 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP2A1O14983 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A1O14983 IRX1P1-201ENST00000438849 1838 ntBASIC21.52■■□□□ 1.04
ATP2A1O14983 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP2A1O14983 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A1O14983 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ATP2A1O14983 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.52■■□□□ 1.03
ATP2A1O14983 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP2A1O14983 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP2A1O14983 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms