Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 AC008764.6-201ENST00000595909 2069 ntBASIC19.48■□□□□ 0.71
SRRM3A6NNA2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 AC139713.2-201ENST00000641328 2723 ntBASIC19.48■□□□□ 0.71
SRRM3A6NNA2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 KRT18P68-201ENST00000392293 1000 ntBASIC19.48■□□□□ 0.71
SRRM3A6NNA2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SRRM3A6NNA2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 TERF1P1-201ENST00000311003 1181 ntBASIC19.47■□□□□ 0.71
SRRM3A6NNA2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 AL137013.1-201ENST00000432946 1228 ntBASIC19.47■□□□□ 0.71
SRRM3A6NNA2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.47■□□□□ 0.71
SRRM3A6NNA2 AC006557.6-201ENST00000623071 864 ntBASIC19.47■□□□□ 0.71
SRRM3A6NNA2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 PTBP1P-201ENST00000554374 1601 ntBASIC19.47■□□□□ 0.71
SRRM3A6NNA2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.47■□□□□ 0.71
SRRM3A6NNA2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.46■□□□□ 0.71
SRRM3A6NNA2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRRM3A6NNA2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRRM3A6NNA2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRRM3A6NNA2 AL162741.1-201ENST00000565563 1558 ntBASIC19.45■□□□□ 0.7
SRRM3A6NNA2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRRM3A6NNA2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRRM3A6NNA2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SRRM3A6NNA2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SRRM3A6NNA2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SRRM3A6NNA2 KRT8P17-201ENST00000453110 1448 ntBASIC19.45■□□□□ 0.7
SRRM3A6NNA2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRRM3A6NNA2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms