Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 MIR564-202ENST00000385049 94 ntBASIC21.94■■□□□ 1.1
SSC5DA1L4H1 AL590627.1-203ENST00000421194 1026 ntBASIC21.94■■□□□ 1.1
SSC5DA1L4H1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.94■■□□□ 1.1
SSC5DA1L4H1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SSC5DA1L4H1 IL9RP2-201ENST00000423948 1312 ntBASIC21.93■■□□□ 1.1
SSC5DA1L4H1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 KRT8P32-201ENST00000512863 1461 ntBASIC21.92■■□□□ 1.1
SSC5DA1L4H1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 PMS2P1-201ENST00000431037 1228 ntBASIC21.92■■□□□ 1.1
SSC5DA1L4H1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 AC139530.3-201ENST00000620344 690 ntBASIC21.92■■□□□ 1.1
SSC5DA1L4H1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.92■■□□□ 1.1
SSC5DA1L4H1 AC006333.2-201ENST00000607957 2099 ntBASIC21.92■■□□□ 1.1
SSC5DA1L4H1 AC112907.3-201ENST00000577781 2400 ntBASIC21.92■■□□□ 1.1
SSC5DA1L4H1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 AC124864.1-201ENST00000623408 392 ntBASIC21.91■■□□□ 1.1
SSC5DA1L4H1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.91■■□□□ 1.1
SSC5DA1L4H1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 MIR574-201ENST00000385209 96 ntBASIC21.91■■□□□ 1.1
SSC5DA1L4H1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 BNIP3P18-201ENST00000593976 575 ntBASIC21.91■■□□□ 1.1
SSC5DA1L4H1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.91■■□□□ 1.1
SSC5DA1L4H1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.91■■□□□ 1.1
SSC5DA1L4H1 AF228730.7-201ENST00000641842 219 ntBASIC21.91■■□□□ 1.1
SSC5DA1L4H1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 AP001005.1-201ENST00000571755 1248 ntBASIC21.9■■□□□ 1.1
SSC5DA1L4H1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 MIR3180-4-201ENST00000582223 153 ntBASIC21.9■■□□□ 1.1
SSC5DA1L4H1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms