Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV10A0A0B4J240 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 GCSHP2-201ENST00000560971 527 ntBASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 GPAT2P1-201ENST00000444924 1672 ntBASIC13.28□□□□□ -0.28
TRAV10A0A0B4J240 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV10A0A0B4J240 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV10A0A0B4J240 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV10A0A0B4J240 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
TRAV10A0A0B4J240 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV10A0A0B4J240 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TRAV10A0A0B4J240 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV10A0A0B4J240 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV10A0A0B4J240 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 AL023284.2-201ENST00000405850 579 ntBASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 PCED1CP-201ENST00000419887 785 ntBASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 AC112907.2-201ENST00000448639 330 ntBASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 IER3-202ENST00000376377 1350 ntBASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV10A0A0B4J240 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAV10A0A0B4J240 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV10A0A0B4J240 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV10A0A0B4J240 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV10A0A0B4J240 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms