Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 UNC93B2-201ENST00000285383 730 ntBASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 MIR4497-201ENST00000583208 89 ntBASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV2A0A0B4J234 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 KRT8P3-201ENST00000519669 1449 ntBASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 AC008040.2-201ENST00000461049 708 ntBASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV2A0A0B4J234 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms