Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 MIR1284-201ENST00000408337 120 ntBASIC-5.24□□□□□ -3.25
VPS13AQ96RL7 RNU6-1225P-201ENST00000516336 65 ntBASIC-5.24□□□□□ -3.25
VPS13AQ96RL7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-5.24□□□□□ -3.25
VPS13AQ96RL7 MIR548H4-201ENST00000408689 111 ntBASIC-5.24□□□□□ -3.25
VPS13AQ96RL7 RNU6-273P-201ENST00000516937 96 ntBASIC-5.25□□□□□ -3.25
VPS13AQ96RL7 MIR5688-201ENST00000580619 83 ntBASIC-5.25□□□□□ -3.25
VPS13AQ96RL7 MIR1236-201ENST00000408340 102 ntBASIC-5.26□□□□□ -3.25
VPS13AQ96RL7 RNU6-1148P-201ENST00000410992 104 ntBASIC-5.26□□□□□ -3.25
VPS13AQ96RL7 MIR8053-201ENST00000613344 75 ntBASIC-5.26□□□□□ -3.25
VPS13AQ96RL7 MTND4LP25-201ENST00000570218 163 ntBASIC-5.27□□□□□ -3.25
VPS13AQ96RL7 MIR4775-201ENST00000581168 75 ntBASIC-5.27□□□□□ -3.25
VPS13AQ96RL7 Y_RNA.176-201ENST00000363815 109 ntBASIC-5.27□□□□□ -3.25
VPS13AQ96RL7 RNU6-462P-201ENST00000362659 105 ntBASIC-5.28□□□□□ -3.25
VPS13AQ96RL7 Y_RNA.408-201ENST00000383987 102 ntBASIC-5.28□□□□□ -3.25
VPS13AQ96RL7 RNU6-1109P-201ENST00000391187 107 ntBASIC-5.28□□□□□ -3.25
VPS13AQ96RL7 RNU6-1003P-201ENST00000517099 105 ntBASIC-5.28□□□□□ -3.25
VPS13AQ96RL7 SNORD81.1-201ENST00000363064 77 ntBASIC-5.28□□□□□ -3.25
VPS13AQ96RL7 MIR517A-201ENST00000385001 87 ntBASIC-5.28□□□□□ -3.25
VPS13AQ96RL7 MRPL42P2-201ENST00000403169 426 ntBASIC-5.28□□□□□ -3.25
VPS13AQ96RL7 RNU6-564P-201ENST00000410983 104 ntBASIC-5.28□□□□□ -3.26
VPS13AQ96RL7 AC019235.1-201ENST00000503847 207 ntBASIC-5.29□□□□□ -3.26
VPS13AQ96RL7 MIR3163-201ENST00000581592 73 ntBASIC-5.29□□□□□ -3.26
VPS13AQ96RL7 DEFB117-201ENST00000602356 141 ntBASIC-5.29□□□□□ -3.26
VPS13AQ96RL7 MIR4703-201ENST00000577728 79 ntBASIC-5.3□□□□□ -3.26
VPS13AQ96RL7 RNU6-450P-201ENST00000364654 107 ntBASIC-5.3□□□□□ -3.26
VPS13AQ96RL7 RNU7-187P-201ENST00000458985 68 ntBASIC-5.3□□□□□ -3.26
VPS13AQ96RL7 RNU6-1108P-201ENST00000516308 104 ntBASIC-5.3□□□□□ -3.26
VPS13AQ96RL7 U2.1-201ENST00000618978 145 ntBASIC-5.3□□□□□ -3.26
VPS13AQ96RL7 SNORA75-201ENST00000384158 137 ntBASIC-5.31□□□□□ -3.26
VPS13AQ96RL7 MT-TT-201ENST00000387460 66 ntBASIC-5.31□□□□□ -3.26
VPS13AQ96RL7 RNU6-120P-201ENST00000516077 103 ntBASIC-5.31□□□□□ -3.26
VPS13AQ96RL7 MIR4439-201ENST00000583746 80 ntBASIC-5.31□□□□□ -3.26
VPS13AQ96RL7 RNU6-88P-201ENST00000606801 100 ntBASIC-5.31□□□□□ -3.26
VPS13AQ96RL7 Y_RNA.155-201ENST00000363632 101 ntBASIC-5.31□□□□□ -3.26
VPS13AQ96RL7 Y_RNA.367-201ENST00000365544 101 ntBASIC-5.31□□□□□ -3.26
VPS13AQ96RL7 RNU6-453P-201ENST00000516819 85 ntBASIC-5.31□□□□□ -3.26
VPS13AQ96RL7 MIR4273-201ENST00000582824 84 ntBASIC-5.31□□□□□ -3.26
VPS13AQ96RL7 RN7SKP295-201ENST00000517264 153 ntBASIC-5.32□□□□□ -3.26
VPS13AQ96RL7 RNU6-662P-201ENST00000384253 104 ntBASIC-5.32□□□□□ -3.26
VPS13AQ96RL7 Y_RNA.655-201ENST00000515919 96 ntBASIC-5.32□□□□□ -3.26
VPS13AQ96RL7 AC009161.2-201ENST00000624626 138 ntBASIC-5.32□□□□□ -3.26
VPS13AQ96RL7 MT-TI-201ENST00000387365 69 ntBASIC-5.32□□□□□ -3.26
VPS13AQ96RL7 AP002963.1-201ENST00000530590 184 ntBASIC-5.32□□□□□ -3.26
VPS13AQ96RL7 RNU6-1090P-201ENST00000364065 94 ntBASIC-5.34□□□□□ -3.26
VPS13AQ96RL7 MT-TH-201ENST00000387441 69 ntBASIC-5.34□□□□□ -3.26
VPS13AQ96RL7 MIR4801-201ENST00000582704 82 ntBASIC-5.34□□□□□ -3.27
VPS13AQ96RL7 RNY4P20-201ENST00000516678 93 ntBASIC-5.36□□□□□ -3.27
VPS13AQ96RL7 SNORD113.1-201ENST00000363280 73 ntBASIC-5.36□□□□□ -3.27
VPS13AQ96RL7 Y_RNA.424-201ENST00000384063 103 ntBASIC-5.36□□□□□ -3.27
VPS13AQ96RL7 RNU6-358P-201ENST00000516564 75 ntBASIC-5.37□□□□□ -3.27
VPS13AQ96RL7 MIR4307-201ENST00000582802 84 ntBASIC-5.37□□□□□ -3.27
VPS13AQ96RL7 RNU6-537P-201ENST00000517277 103 ntBASIC-5.37□□□□□ -3.27
VPS13AQ96RL7 Y_RNA.544-201ENST00000384650 113 ntBASIC-5.38□□□□□ -3.27
VPS13AQ96RL7 MIR4796-201ENST00000580742 81 ntBASIC-5.38□□□□□ -3.27
VPS13AQ96RL7 RNU6-891P-201ENST00000384280 111 ntBASIC-5.39□□□□□ -3.27
VPS13AQ96RL7 DLEU2_5.1-201ENST00000615567 84 ntBASIC-5.39□□□□□ -3.27
VPS13AQ96RL7 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.39□□□□□ -3.27
VPS13AQ96RL7 SNORD78.2-201ENST00000391076 69 ntBASIC-5.39□□□□□ -3.27
VPS13AQ96RL7 MIR548AI-201ENST00000579940 88 ntBASIC-5.39□□□□□ -3.27
VPS13AQ96RL7 RNU6-298P-201ENST00000390888 96 ntBASIC-5.39□□□□□ -3.27
VPS13AQ96RL7 RNU6-1103P-201ENST00000384150 107 ntBASIC-5.4□□□□□ -3.27
VPS13AQ96RL7 Y_RNA.526-201ENST00000384572 110 ntBASIC-5.4□□□□□ -3.27
VPS13AQ96RL7 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.4□□□□□ -3.27
VPS13AQ96RL7 MIR4777-201ENST00000583710 86 ntBASIC-5.4□□□□□ -3.27
VPS13AQ96RL7 AL137067.1-201ENST00000615933 120 ntBASIC-5.4□□□□□ -3.27
VPS13AQ96RL7 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.41□□□□□ -3.28
VPS13AQ96RL7 SNORD45B-201ENST00000364617 72 ntBASIC-5.41□□□□□ -3.28
VPS13AQ96RL7 RNU6-620P-201ENST00000384017 96 ntBASIC-5.41□□□□□ -3.28
VPS13AQ96RL7 RNU6-330P-201ENST00000363015 107 ntBASIC-5.42□□□□□ -3.28
VPS13AQ96RL7 AC006386.1-201ENST00000619436 415 ntBASIC-5.42□□□□□ -3.28
VPS13AQ96RL7 SNORD115.1-201ENST00000391109 76 ntBASIC-5.43□□□□□ -3.28
VPS13AQ96RL7 SNORA8.1-201ENST00000384250 140 ntBASIC-5.44□□□□□ -3.28
VPS13AQ96RL7 RNU6-303P-201ENST00000517091 106 ntBASIC-5.44□□□□□ -3.28
VPS13AQ96RL7 Y_RNA.602-201ENST00000410535 92 ntBASIC-5.44□□□□□ -3.28
VPS13AQ96RL7 MIR5708-201ENST00000579723 85 ntBASIC-5.44□□□□□ -3.28
VPS13AQ96RL7 AC112204.1-201ENST00000502591 103 ntBASIC-5.45□□□□□ -3.28
VPS13AQ96RL7 RNU6-561P-201ENST00000516222 102 ntBASIC-5.45□□□□□ -3.28
VPS13AQ96RL7 Y_RNA.462-201ENST00000384268 102 ntBASIC-5.45□□□□□ -3.28
VPS13AQ96RL7 Y_RNA.152-201ENST00000363578 100 ntBASIC-5.46□□□□□ -3.28
VPS13AQ96RL7 RNU6-723P-201ENST00000383973 107 ntBASIC-5.46□□□□□ -3.28
VPS13AQ96RL7 RNU6-74P-201ENST00000384235 107 ntBASIC-5.46□□□□□ -3.28
VPS13AQ96RL7 AC068137.3-201ENST00000639191 341 ntBASIC-5.46□□□□□ -3.28
VPS13AQ96RL7 SNORD116-2-201ENST00000384274 95 ntBASIC-5.46□□□□□ -3.28
VPS13AQ96RL7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-5.47□□□□□ -3.28
VPS13AQ96RL7 RNU7-153P-201ENST00000516455 62 ntBASIC-5.47□□□□□ -3.28
VPS13AQ96RL7 Z84480.1-201ENST00000605131 311 ntBASIC-5.47□□□□□ -3.28
VPS13AQ96RL7 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.47□□□□□ -3.28
VPS13AQ96RL7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-5.47□□□□□ -3.28
VPS13AQ96RL7 RNU6-517P-201ENST00000384362 110 ntBASIC-5.47□□□□□ -3.29
VPS13AQ96RL7 MIR577-201ENST00000385196 96 ntBASIC-5.47□□□□□ -3.29
VPS13AQ96RL7 RNU6-648P-201ENST00000410190 107 ntBASIC-5.47□□□□□ -3.29
VPS13AQ96RL7 Y_RNA.275-201ENST00000364726 110 ntBASIC-5.48□□□□□ -3.29
VPS13AQ96RL7 AP001318.4-201ENST00000616637 121 ntBASIC-5.48□□□□□ -3.29
VPS13AQ96RL7 U6.112-201ENST00000384129 70 ntBASIC-5.48□□□□□ -3.29
VPS13AQ96RL7 AL731563.1-201ENST00000442202 214 ntBASIC-5.48□□□□□ -3.29
VPS13AQ96RL7 SNORA19.2-201ENST00000516013 114 ntBASIC-5.48□□□□□ -3.29
VPS13AQ96RL7 MIR5583-1-201ENST00000580941 59 ntBASIC-5.48□□□□□ -3.29
VPS13AQ96RL7 RNU4-43P-201ENST00000410628 137 ntBASIC-5.49□□□□□ -3.29
VPS13AQ96RL7 SNORA20.3-201ENST00000516880 132 ntBASIC-5.49□□□□□ -3.29
VPS13AQ96RL7 MIR4789-201ENST00000577469 82 ntBASIC-5.49□□□□□ -3.29
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms