Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC0.96□□□□□ -2.26
KRTAP4-11Q9BYQ6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
KRTAP4-11Q9BYQ6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP4-11Q9BYQ6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 Y_RNA.164-201ENST00000363709 102 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 Y_RNA.349-201ENST00000365406 102 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNU6-900P-201ENST00000384498 102 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNU6-901P-201ENST00000384593 106 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR221-201ENST00000385135 110 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR876-201ENST00000401147 81 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 RPS26P2-201ENST00000440331 348 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 AC090616.4-201ENST00000448026 115 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNU6-983P-201ENST00000516004 103 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 SNORA70.18-201ENST00000516696 98 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR7702-201ENST00000621931 59 ntBASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP4-11Q9BYQ6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 SNORD113-3-201ENST00000364830 72 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 SNORA2A-201ENST00000383885 135 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR627-201ENST00000384979 97 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR501-201ENST00000390204 84 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 HDGFP1-201ENST00000405943 252 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR1287-201ENST00000408492 90 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 AC090543.2-201ENST00000483963 348 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR4319-201ENST00000577285 85 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR4529-201ENST00000578110 78 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 AP000553.6-201ENST00000641242 118 ntBASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-11Q9BYQ6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR18A-201ENST00000362310 71 ntBASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR513A2-201ENST00000385249 127 ntBASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNA5SP424-201ENST00000390988 115 ntBASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNA5SP212-201ENST00000391223 107 ntBASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 AC069271.1-201ENST00000445577 156 ntBASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 snoU13.9-201ENST00000458927 103 ntBASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNU6-863P-201ENST00000515989 104 ntBASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNU6-1232P-201ENST00000516299 86 ntBASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-11Q9BYQ6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR448-201ENST00000362131 111 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 Y_RNA.355-201ENST00000365462 98 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR708-201ENST00000390708 88 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR764-201ENST00000390811 85 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR548H1-201ENST00000408610 102 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 AC114755.3-201ENST00000481111 251 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNA5SP458-201ENST00000516188 119 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNA5SP24-201ENST00000516478 95 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR151B-201ENST00000584249 96 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 AC046143.2-201ENST00000609789 160 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 5S_rRNA.16-201ENST00000612928 119 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 AP003355.3-201ENST00000623465 114 ntBASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC0.92□□□□□ -2.26
KRTAP4-11Q9BYQ6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNA5SP99-201ENST00000364020 114 ntBASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 RNA5SP39-201ENST00000411245 120 ntBASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 SNORA31.25-201ENST00000517242 134 ntBASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 MIR2682-201ENST00000580305 110 ntBASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP4-11Q9BYQ6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.26
KRTAP4-11Q9BYQ6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
KRTAP4-11Q9BYQ6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
KRTAP4-11Q9BYQ6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORD74.4-201ENST00000364129 80 ntBASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNU6-737P-201ENST00000365370 107 ntBASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR184-201ENST00000384962 84 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms